Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
HOXD8P13378 AL596275.2-204ENST00000641628 552 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 AL596275.2-206ENST00000641957 626 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HOXD8P13378 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXD8P13378 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXD8P13378 AC073136.1-201ENST00000449426 2884 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HOXD8P13378 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD8P13378 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD8P13378 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HOXD8P13378 MTND5P6-201ENST00000422338 1798 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HOXD8P13378 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD8P13378 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD8P13378 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD8P13378 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD8P13378 Y_RNA.48-201ENST00000362710 103 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD8P13378 RNU6-933P-201ENST00000384424 107 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 MIR659-201ENST00000384963 97 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 AL445529.1-201ENST00000398713 389 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXD8P13378 CYCSP10-201ENST00000417973 294 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 RBMY1KP-201ENST00000423480 476 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 HMGB1P27-201ENST00000431429 603 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 AL133396.1-201ENST00000432048 687 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD8P13378 RPL12P18-201ENST00000437175 325 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 BTF3P6-201ENST00000448054 499 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 RPS3AP46-201ENST00000448352 682 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXD8P13378 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXD8P13378 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXD8P13378 RPL7P23-201ENST00000493874 747 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXD8P13378 ACA59.1-201ENST00000515966 143 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 RN7SKP21-201ENST00000516503 220 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.19□□□□□ -1.58
HOXD8P13378 AP003385.6-201ENST00000531603 374 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 RRN3P3-201ENST00000549207 578 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 AC067852.3-201ENST00000589177 561 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 AC093227.2-201ENST00000589357 285 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 AC098479.1-201ENST00000609225 154 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXD8P13378 AC137590.2-201ENST00000619709 240 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXD8P13378 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
HOXD8P13378 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD8P13378 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXD8P13378 AL031595.2-201ENST00000624215 19071 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HOXD8P13378 ADAM5-202ENST00000399789 1942 ntBASIC5.19□□□□□ -1.58
HOXD8P13378 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD8P13378 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
HOXD8P13378 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD8P13378 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD8P13378 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD8P13378 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXD8P13378 RNU1-35P-201ENST00000362782 153 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 Y_RNA.64-201ENST00000362845 102 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 RNA5SP509-201ENST00000364577 119 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 Y_RNA.276-201ENST00000364732 109 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 MIR625-201ENST00000385047 85 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 MIR628-201ENST00000385229 95 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXD8P13378 RPL21P90-201ENST00000415692 466 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 RPL7P2-201ENST00000427639 268 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 AC008065.1-201ENST00000428525 348 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 AC004866.2-201ENST00000438285 481 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXD8P13378 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD8P13378 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXD8P13378 AL591623.2-201ENST00000449978 222 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD8P13378 MTND4LP30-201ENST00000454092 297 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 SNORA25.11-201ENST00000515935 105 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 Y_RNA.673-201ENST00000516306 88 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 RNU6-570P-201ENST00000517051 105 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXD8P13378 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD8P13378 OR1M4P-201ENST00000589199 287 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXD8P13378 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD8P13378 HMGB1P50-201ENST00000605814 607 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 MIR6130-201ENST00000619419 109 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 MIR4496-201ENST00000635896 61 ntBASIC5.18□□□□□ -1.58
HOXD8P13378 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
HOXD8P13378 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD8P13378 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HOXD8P13378 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HOXD8P13378 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HOXD8P13378 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXD8P13378 DHX9P1-201ENST00000436565 3076 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD8P13378 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXD8P13378 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD8P13378 AL359893.1-201ENST00000447628 1580 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms