Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL11A1P12107 MFSD8-213ENST00000641134 1327 ntBASIC1.88□□□□□ -2.11
COL11A1P12107 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL11A1P12107 RNU6-582P-201ENST00000362989 107 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL11A1P12107 PRRC2CP1-201ENST00000404428 159 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.87□□□□□ -2.11
COL11A1P12107 RPS6P14-201ENST00000425165 719 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 DEFB130D-201ENST00000426866 237 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AC092634.2-201ENST00000428146 1010 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AC097499.1-201ENST00000444277 208 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.87□□□□□ -2.11
COL11A1P12107 MTND2P39-201ENST00000457230 764 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.87□□□□□ -2.11
COL11A1P12107 IGLV3-17-201ENST00000519099 244 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.87□□□□□ -2.11
COL11A1P12107 SNRPGP16-201ENST00000533275 226 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.87□□□□□ -2.11
COL11A1P12107 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.87□□□□□ -2.11
COL11A1P12107 MTCO3P24-201ENST00000572729 782 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.87□□□□□ -2.11
COL11A1P12107 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.87□□□□□ -2.11
COL11A1P12107 AC092953.2-201ENST00000608000 699 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AL391262.2-201ENST00000622466 494 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AL138955.1-201ENST00000622881 1040 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.87□□□□□ -2.11
COL11A1P12107 ZNF876P-202ENST00000398732 1485 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
COL11A1P12107 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
COL11A1P12107 AC026241.1-201ENST00000517873 2142 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL11A1P12107 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL11A1P12107 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
COL11A1P12107 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 RNU6-707P-201ENST00000364647 95 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 RNU6-354P-201ENST00000383862 107 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 RNU1-109P-201ENST00000383960 147 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 RNU6-610P-201ENST00000384264 107 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 RNU6-932P-201ENST00000391108 106 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AL591034.1-201ENST00000407447 340 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.87□□□□□ -2.11
COL11A1P12107 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.87□□□□□ -2.11
COL11A1P12107 AC099677.1-201ENST00000420575 175 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 OFD1P18Y-201ENST00000420889 959 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AC114973.1-201ENST00000429057 632 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AL158053.1-201ENST00000441503 453 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 RNF2P1-201ENST00000442955 1010 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.87□□□□□ -2.11
COL11A1P12107 AL137159.1-201ENST00000452808 512 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 RPL32P14-201ENST00000463196 378 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 HMGB1P22-201ENST00000505315 124 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.87□□□□□ -2.11
COL11A1P12107 AC112518.2-201ENST00000508565 425 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 RNU5A-7P-201ENST00000515979 116 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.87□□□□□ -2.11
COL11A1P12107 MYL12BP1-201ENST00000569826 507 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 MIR4789-201ENST00000577469 82 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 RN7SL622P-201ENST00000585292 275 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AC091057.2-201ENST00000602594 792 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AL355812.1-201ENST00000603215 216 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AC008962.1-201ENST00000605729 304 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AL590282.1-201ENST00000610379 1136 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.87□□□□□ -2.11
COL11A1P12107 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
COL11A1P12107 AC068880.4-201ENST00000623082 495 ntBASIC1.87□□□□□ -2.11
COL11A1P12107 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.87□□□□□ -2.11
COL11A1P12107 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
COL11A1P12107 MTCO1P18-201ENST00000455518 1419 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL11A1P12107 RNU6-263P-201ENST00000363811 107 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 Y_RNA.191-201ENST00000363972 113 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
COL11A1P12107 AL355615.1-201ENST00000406187 641 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 AC096533.1-201ENST00000411645 353 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 USP9YP6-201ENST00000413550 854 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 RPS7P9-201ENST00000414704 586 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.86□□□□□ -2.11
COL11A1P12107 FABP5P3-201ENST00000437960 408 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 USP9YP34-201ENST00000453983 808 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 AC011979.1-201ENST00000472300 483 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 HMGN2P13-201ENST00000476476 274 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 RPL21P93-201ENST00000480465 489 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 AC069528.1-202ENST00000482888 637 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 AC233702.1-201ENST00000482905 502 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 AC093591.1-201ENST00000491435 481 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 AC112206.4-201ENST00000515142 405 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 SNORD59.2-201ENST00000516873 68 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.86□□□□□ -2.11
COL11A1P12107 AC083923.1-201ENST00000523708 376 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.86□□□□□ -2.11
COL11A1P12107 AC093510.2-201ENST00000562820 896 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 AC096586.1-201ENST00000610267 561 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 AC078880.5-201ENST00000617845 421 ntBASIC1.86□□□□□ -2.11
COL11A1P12107 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL11A1P12107 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL11A1P12107 AL136164.4-201ENST00000625013 2135 ntBASIC1.85□□□□□ -2.11
COL11A1P12107 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL11A1P12107 HSPE1P11-201ENST00000339579 310 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms