Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MIR5685-201ENST00000579080 79 ntBASIC3.42□□□□□ -1.86
UBL4AP11441 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.42□□□□□ -1.86
UBL4AP11441 AP002360.4-201ENST00000606980 481 ntBASIC3.42□□□□□ -1.86
UBL4AP11441 AC011939.3-201ENST00000613686 466 ntBASIC3.42□□□□□ -1.86
UBL4AP11441 AL732618.1-201ENST00000623251 301 ntBASIC3.42□□□□□ -1.86
UBL4AP11441 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.42□□□□□ -1.86
UBL4AP11441 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
UBL4AP11441 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
UBL4AP11441 AC022336.2-201ENST00000568966 2538 ntBASIC3.42□□□□□ -1.86
UBL4AP11441 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
UBL4AP11441 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
UBL4AP11441 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.42□□□□□ -1.86
UBL4AP11441 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
UBL4AP11441 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UBL4AP11441 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.41□□□□□ -1.86
UBL4AP11441 Y_RNA.359-201ENST00000365498 102 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 DYNLT3P1-201ENST00000378574 347 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
UBL4AP11441 RN7SKP156-201ENST00000410308 342 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 HMGB3P20-201ENST00000417997 600 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 PIGFP2-201ENST00000421400 651 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.41□□□□□ -1.86
UBL4AP11441 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.41□□□□□ -1.86
UBL4AP11441 BNIP3P2-201ENST00000441221 577 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.41□□□□□ -1.86
UBL4AP11441 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.41□□□□□ -1.86
UBL4AP11441 RPL37P6-201ENST00000460682 294 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 KLF3P2-201ENST00000465138 268 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 AL135752.1-201ENST00000479477 471 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.41□□□□□ -1.86
UBL4AP11441 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.41□□□□□ -1.86
UBL4AP11441 MTND3P5-201ENST00000512798 333 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 RN7SKP298-201ENST00000515950 94 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 HMGB1P41-201ENST00000520234 440 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.41□□□□□ -1.86
UBL4AP11441 HIGD1AP1-201ENST00000550979 275 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.41□□□□□ -1.86
UBL4AP11441 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.41□□□□□ -1.86
UBL4AP11441 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.41□□□□□ -1.86
UBL4AP11441 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.41□□□□□ -1.86
UBL4AP11441 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.41□□□□□ -1.86
UBL4AP11441 AC012213.3-201ENST00000577199 777 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 MIR3913-1-201ENST00000577744 102 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 AC104763.2-201ENST00000604179 382 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 AC008498.1-201ENST00000613012 531 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UBL4AP11441 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.41□□□□□ -1.86
UBL4AP11441 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.41□□□□□ -1.86
UBL4AP11441 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.41□□□□□ -1.86
UBL4AP11441 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.41□□□□□ -1.86
UBL4AP11441 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
UBL4AP11441 AC007656.2-201ENST00000624902 4547 ntBASIC3.41□□□□□ -1.86
UBL4AP11441 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.41□□□□□ -1.86
UBL4AP11441 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
UBL4AP11441 CR848007.1-201ENST00000442354 1699 ntBASIC3.4□□□□□ -1.86
UBL4AP11441 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
UBL4AP11441 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
UBL4AP11441 Y_RNA.194-201ENST00000363985 102 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 RN7SKP280-201ENST00000364196 304 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 RNU4-24P-201ENST00000364565 139 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 RNU6-169P-201ENST00000365336 107 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 RNA5SP293-201ENST00000410527 113 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 SNORA57.3-201ENST00000411095 141 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.4□□□□□ -1.87
UBL4AP11441 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
UBL4AP11441 MTND3P17-201ENST00000416968 344 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 BTF3L4P3-201ENST00000418879 476 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 AL139247.1-201ENST00000422768 325 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 GOT2P5-201ENST00000433995 546 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 RPS24P1-201ENST00000438550 371 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 AC009969.1-201ENST00000438726 172 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.4□□□□□ -1.87
UBL4AP11441 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.4□□□□□ -1.87
UBL4AP11441 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.4□□□□□ -1.87
UBL4AP11441 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
UBL4AP11441 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.4□□□□□ -1.87
UBL4AP11441 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.4□□□□□ -1.87
UBL4AP11441 KCTD9P5-201ENST00000504141 1170 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 PCBP2P3-201ENST00000509726 843 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.4□□□□□ -1.87
UBL4AP11441 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.4□□□□□ -1.87
UBL4AP11441 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.4□□□□□ -1.87
UBL4AP11441 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.4□□□□□ -1.87
UBL4AP11441 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.4□□□□□ -1.87
UBL4AP11441 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.4□□□□□ -1.87
UBL4AP11441 MIR5187-201ENST00000583479 76 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 AC174048.1-201ENST00000603389 144 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 MIR98-201ENST00000606724 119 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 AL589994.2-201ENST00000621124 579 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 AP000553.6-201ENST00000641242 118 ntBASIC3.4□□□□□ -1.87
UBL4AP11441 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.4□□□□□ -1.87
UBL4AP11441 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.39□□□□□ -1.87
UBL4AP11441 RNU6-1167P-201ENST00000363227 94 ntBASIC3.39□□□□□ -1.87
UBL4AP11441 RNA5SP515-201ENST00000364570 118 ntBASIC3.39□□□□□ -1.87
UBL4AP11441 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
UBL4AP11441 RNU6-1119P-201ENST00000384349 108 ntBASIC3.39□□□□□ -1.87
UBL4AP11441 RNU6-14P-201ENST00000384630 106 ntBASIC3.39□□□□□ -1.87
UBL4AP11441 AL663109.1-201ENST00000411498 844 ntBASIC3.39□□□□□ -1.87
UBL4AP11441 NDUFB4P5-201ENST00000415445 361 ntBASIC3.39□□□□□ -1.87
UBL4AP11441 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms