Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 MIR5680-201ENST00000577577 84 ntBASIC3.22□□□□□ -1.89
CD48P09326 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.22□□□□□ -1.89
CD48P09326 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.22□□□□□ -1.89
CD48P09326 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.22□□□□□ -1.89
CD48P09326 AC012468.1-201ENST00000604888 430 ntBASIC3.22□□□□□ -1.89
CD48P09326 AC004853.1-201ENST00000604902 698 ntBASIC3.22□□□□□ -1.89
CD48P09326 AC098614.4-201ENST00000607601 462 ntBASIC3.22□□□□□ -1.89
CD48P09326 AC007684.1-201ENST00000609671 477 ntBASIC3.22□□□□□ -1.89
CD48P09326 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.22□□□□□ -1.89
CD48P09326 U6atac.1-201ENST00000616025 117 ntBASIC3.22□□□□□ -1.89
CD48P09326 AC073534.2-201ENST00000620377 381 ntBASIC3.22□□□□□ -1.89
CD48P09326 AC018692.3-201ENST00000623929 123 ntBASIC3.22□□□□□ -1.89
CD48P09326 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CD48P09326 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CD48P09326 MTND5P19-201ENST00000424872 1794 ntBASIC3.21□□□□□ -1.9
CD48P09326 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
CD48P09326 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CD48P09326 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.21□□□□□ -1.9
CD48P09326 SNORA7.4-201ENST00000384249 137 ntBASIC3.21□□□□□ -1.9
CD48P09326 MT-TC-201ENST00000387405 66 ntBASIC3.21□□□□□ -1.9
CD48P09326 FCF1P10-201ENST00000407590 479 ntBASIC3.21□□□□□ -1.9
CD48P09326 MTCYBP24-201ENST00000420387 1106 ntBASIC3.21□□□□□ -1.9
CD48P09326 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.21□□□□□ -1.9
CD48P09326 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.21□□□□□ -1.9
CD48P09326 MTATP6P13-201ENST00000438531 667 ntBASIC3.21□□□□□ -1.9
CD48P09326 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.21□□□□□ -1.9
CD48P09326 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CD48P09326 RPL29P29-201ENST00000448725 423 ntBASIC3.21□□□□□ -1.9
CD48P09326 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.21□□□□□ -1.9
CD48P09326 RPS20P32-201ENST00000456044 356 ntBASIC3.21□□□□□ -1.9
CD48P09326 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.21□□□□□ -1.9
CD48P09326 HMGB1P25-201ENST00000468402 607 ntBASIC3.21□□□□□ -1.9
CD48P09326 AC109925.1-201ENST00000478069 331 ntBASIC3.21□□□□□ -1.9
CD48P09326 RPL21P103-201ENST00000479921 488 ntBASIC3.21□□□□□ -1.9
CD48P09326 MTND1P3-201ENST00000484956 952 ntBASIC3.21□□□□□ -1.9
CD48P09326 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.21□□□□□ -1.9
CD48P09326 RPL9P6-201ENST00000492764 598 ntBASIC3.21□□□□□ -1.9
CD48P09326 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CD48P09326 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.21□□□□□ -1.9
CD48P09326 AC074250.1-201ENST00000511117 192 ntBASIC3.21□□□□□ -1.9
CD48P09326 AC022483.1-201ENST00000514020 567 ntBASIC3.21□□□□□ -1.9
CD48P09326 Y_RNA.672-201ENST00000516289 104 ntBASIC3.21□□□□□ -1.9
CD48P09326 RNU6-506P-201ENST00000516553 94 ntBASIC3.21□□□□□ -1.9
CD48P09326 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CD48P09326 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.21□□□□□ -1.9
CD48P09326 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.21□□□□□ -1.9
CD48P09326 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.21□□□□□ -1.9
CD48P09326 SETP7-201ENST00000552169 453 ntBASIC3.21□□□□□ -1.9
CD48P09326 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.21□□□□□ -1.9
CD48P09326 TPRKBP2-201ENST00000565969 475 ntBASIC3.21□□□□□ -1.9
CD48P09326 OR10AB1P-201ENST00000609613 938 ntBASIC3.21□□□□□ -1.9
CD48P09326 AC068944.2-201ENST00000610373 403 ntBASIC3.21□□□□□ -1.9
CD48P09326 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.21□□□□□ -1.9
CD48P09326 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.21□□□□□ -1.9
CD48P09326 AL160394.1-201ENST00000624765 724 ntBASIC3.21□□□□□ -1.9
CD48P09326 OR5AK4P-201ENST00000635912 903 ntBASIC3.21□□□□□ -1.9
CD48P09326 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.21□□□□□ -1.9
CD48P09326 AC009902.3-201ENST00000606235 2172 ntBASIC3.21□□□□□ -1.9
CD48P09326 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.2□□□□□ -1.9
CD48P09326 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CD48P09326 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CD48P09326 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CD48P09326 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CD48P09326 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CD48P09326 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.2□□□□□ -1.9
CD48P09326 OR4G2P-201ENST00000328113 903 ntBASIC3.2□□□□□ -1.9
CD48P09326 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CD48P09326 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CD48P09326 RN7SKP123-201ENST00000410732 291 ntBASIC3.2□□□□□ -1.9
CD48P09326 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.2□□□□□ -1.9
CD48P09326 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.2□□□□□ -1.9
CD48P09326 SPA17P1-201ENST00000416656 452 ntBASIC3.2□□□□□ -1.9
CD48P09326 PIGFP2-201ENST00000421400 651 ntBASIC3.2□□□□□ -1.9
CD48P09326 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.2□□□□□ -1.9
CD48P09326 MTCYBP5-201ENST00000423752 1135 ntBASIC3.2□□□□□ -1.9
CD48P09326 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.2□□□□□ -1.9
CD48P09326 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.2□□□□□ -1.9
CD48P09326 AL049734.2-201ENST00000441066 616 ntBASIC3.2□□□□□ -1.9
CD48P09326 RPL23AP33-201ENST00000442301 452 ntBASIC3.2□□□□□ -1.9
CD48P09326 AL590399.6-201ENST00000446396 307 ntBASIC3.2□□□□□ -1.9
CD48P09326 AC016696.1-201ENST00000446949 318 ntBASIC3.2□□□□□ -1.9
CD48P09326 GAPDHP27-201ENST00000447427 1020 ntBASIC3.2□□□□□ -1.9
CD48P09326 AC104308.1-201ENST00000454621 333 ntBASIC3.2□□□□□ -1.9
CD48P09326 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.2□□□□□ -1.9
CD48P09326 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.2□□□□□ -1.9
CD48P09326 AC021382.1-201ENST00000483523 359 ntBASIC3.2□□□□□ -1.9
CD48P09326 AC012170.1-201ENST00000495139 359 ntBASIC3.2□□□□□ -1.9
CD48P09326 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.2□□□□□ -1.9
CD48P09326 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.2□□□□□ -1.9
CD48P09326 AC011352.1-201ENST00000512300 793 ntBASIC3.2□□□□□ -1.9
CD48P09326 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.2□□□□□ -1.9
CD48P09326 RNU6-27P-201ENST00000516146 107 ntBASIC3.2□□□□□ -1.9
CD48P09326 AC022616.6-201ENST00000520479 119 ntBASIC3.2□□□□□ -1.9
CD48P09326 IGHV3-76-201ENST00000522465 295 ntBASIC3.2□□□□□ -1.9
CD48P09326 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.2□□□□□ -1.9
CD48P09326 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.2□□□□□ -1.9
CD48P09326 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.2□□□□□ -1.9
CD48P09326 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.2□□□□□ -1.9
CD48P09326 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.2□□□□□ -1.9
CD48P09326 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms