Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.23□□□□□ -2.05
TPM3P06753 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.23□□□□□ -2.05
TPM3P06753 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TPM3P06753 AC080013.4-201ENST00000607624 649 ntBASIC2.23□□□□□ -2.05
TPM3P06753 MIR6873-201ENST00000622788 63 ntBASIC2.23□□□□□ -2.05
TPM3P06753 AL512506.2-201ENST00000624472 458 ntBASIC2.23□□□□□ -2.05
TPM3P06753 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
TPM3P06753 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.23□□□□□ -2.05
TPM3P06753 MIR676-201ENST00000390702 67 ntBASIC2.22□□□□□ -2.05
TPM3P06753 MTCO2P31-201ENST00000402702 684 ntBASIC2.22□□□□□ -2.05
TPM3P06753 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.22□□□□□ -2.05
TPM3P06753 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.22□□□□□ -2.05
TPM3P06753 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.22□□□□□ -2.05
TPM3P06753 AC236972.1-201ENST00000433225 199 ntBASIC2.22□□□□□ -2.05
TPM3P06753 RPL35AP22-201ENST00000436855 335 ntBASIC2.22□□□□□ -2.05
TPM3P06753 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TPM3P06753 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.22□□□□□ -2.05
TPM3P06753 AC055731.1-201ENST00000474387 401 ntBASIC2.22□□□□□ -2.05
TPM3P06753 AC126389.1-201ENST00000477436 290 ntBASIC2.22□□□□□ -2.05
TPM3P06753 AL049874.1-201ENST00000489560 388 ntBASIC2.22□□□□□ -2.05
TPM3P06753 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.22□□□□□ -2.05
TPM3P06753 AC103783.1-201ENST00000520506 373 ntBASIC2.22□□□□□ -2.05
TPM3P06753 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.22□□□□□ -2.05
TPM3P06753 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.22□□□□□ -2.05
TPM3P06753 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
TPM3P06753 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.22□□□□□ -2.05
TPM3P06753 AC026464.5-201ENST00000562497 722 ntBASIC2.22□□□□□ -2.05
TPM3P06753 AC007229.1-201ENST00000590455 412 ntBASIC2.22□□□□□ -2.05
TPM3P06753 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.22□□□□□ -2.05
TPM3P06753 AL109918.3-201ENST00000603072 338 ntBASIC2.22□□□□□ -2.05
TPM3P06753 AC025588.2-201ENST00000604851 466 ntBASIC2.22□□□□□ -2.05
TPM3P06753 AC005000.2-201ENST00000605468 310 ntBASIC2.22□□□□□ -2.05
TPM3P06753 DUXAP10-204ENST00000612052 616 ntBASIC2.22□□□□□ -2.05
TPM3P06753 AL392048.1-201ENST00000613946 534 ntBASIC2.22□□□□□ -2.05
TPM3P06753 AL445493.3-201ENST00000619568 477 ntBASIC2.22□□□□□ -2.05
TPM3P06753 AL162233.1-201ENST00000620014 944 ntBASIC2.22□□□□□ -2.05
TPM3P06753 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.22□□□□□ -2.05
TPM3P06753 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TPM3P06753 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TPM3P06753 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
TPM3P06753 MIR208A-201ENST00000362287 71 ntBASIC2.21□□□□□ -2.06
TPM3P06753 U3.12-201ENST00000364498 214 ntBASIC2.21□□□□□ -2.06
TPM3P06753 RNU6-217P-201ENST00000384164 104 ntBASIC2.21□□□□□ -2.06
TPM3P06753 AL031679.1-201ENST00000400616 525 ntBASIC2.21□□□□□ -2.06
TPM3P06753 HMGB1P17-201ENST00000403495 628 ntBASIC2.21□□□□□ -2.06
TPM3P06753 VN1R42P-201ENST00000424651 344 ntBASIC2.21□□□□□ -2.06
TPM3P06753 PIGFP3-201ENST00000441918 722 ntBASIC2.21□□□□□ -2.06
TPM3P06753 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.21□□□□□ -2.06
TPM3P06753 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TPM3P06753 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.21□□□□□ -2.06
TPM3P06753 CDC42P1-201ENST00000456658 548 ntBASIC2.21□□□□□ -2.06
TPM3P06753 AP1S2P1-201ENST00000457344 379 ntBASIC2.21□□□□□ -2.06
TPM3P06753 MRPS17P3-201ENST00000465453 385 ntBASIC2.21□□□□□ -2.06
TPM3P06753 DYNLL1P5-201ENST00000467158 270 ntBASIC2.21□□□□□ -2.06
TPM3P06753 HMGB3P17-201ENST00000504195 649 ntBASIC2.21□□□□□ -2.06
TPM3P06753 AC022447.1-201ENST00000515358 464 ntBASIC2.21□□□□□ -2.06
TPM3P06753 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.21□□□□□ -2.06
TPM3P06753 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.21□□□□□ -2.06
TPM3P06753 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.21□□□□□ -2.06
TPM3P06753 LARP7P2-201ENST00000575306 125 ntBASIC2.21□□□□□ -2.06
TPM3P06753 MIR5571-201ENST00000577998 113 ntBASIC2.21□□□□□ -2.06
TPM3P06753 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.21□□□□□ -2.06
TPM3P06753 AC008498.1-201ENST00000613012 531 ntBASIC2.21□□□□□ -2.06
TPM3P06753 AC016911.1-201ENST00000613297 452 ntBASIC2.21□□□□□ -2.06
TPM3P06753 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.2□□□□□ -2.06
TPM3P06753 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
TPM3P06753 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
TPM3P06753 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TPM3P06753 OR1L1-202ENST00000373686 1083 ntBASIC2.2□□□□□ -2.06
TPM3P06753 SNORD65C-201ENST00000390962 71 ntBASIC2.2□□□□□ -2.06
TPM3P06753 AL136133.1-201ENST00000413694 376 ntBASIC2.2□□□□□ -2.06
TPM3P06753 HMGB1P49-201ENST00000418882 569 ntBASIC2.2□□□□□ -2.06
TPM3P06753 AC018630.2-202ENST00000422992 927 ntBASIC2.2□□□□□ -2.06
TPM3P06753 EIF4EP4-201ENST00000424916 578 ntBASIC2.2□□□□□ -2.06
TPM3P06753 AC027124.2-201ENST00000428249 105 ntBASIC2.2□□□□□ -2.06
TPM3P06753 RPL23AP83-201ENST00000434984 473 ntBASIC2.2□□□□□ -2.06
TPM3P06753 SDCBPP1-201ENST00000440192 890 ntBASIC2.2□□□□□ -2.06
TPM3P06753 OR10R1P-201ENST00000441524 1141 ntBASIC2.2□□□□□ -2.06
TPM3P06753 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.2□□□□□ -2.06
TPM3P06753 AC105252.1-201ENST00000503089 286 ntBASIC2.2□□□□□ -2.06
TPM3P06753 AC118282.2-201ENST00000508739 374 ntBASIC2.2□□□□□ -2.06
TPM3P06753 AC006499.2-201ENST00000513470 337 ntBASIC2.2□□□□□ -2.06
TPM3P06753 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.2□□□□□ -2.06
TPM3P06753 AP001317.1-201ENST00000531194 960 ntBASIC2.2□□□□□ -2.06
TPM3P06753 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TPM3P06753 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.2□□□□□ -2.06
TPM3P06753 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.2□□□□□ -2.06
TPM3P06753 AC010378.1-201ENST00000619270 362 ntBASIC2.2□□□□□ -2.06
TPM3P06753 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.2□□□□□ -2.06
TPM3P06753 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
TPM3P06753 OR4G2P-202ENST00000641004 1759 ntBASIC2.2□□□□□ -2.06
TPM3P06753 DBF4P1-201ENST00000412976 1892 ntBASIC2.2□□□□□ -2.06
TPM3P06753 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.19□□□□□ -2.06
TPM3P06753 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TPM3P06753 AC083799.1-201ENST00000366451 910 ntBASIC2.19□□□□□ -2.06
TPM3P06753 CYCSP48-201ENST00000417124 323 ntBASIC2.19□□□□□ -2.06
TPM3P06753 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.19□□□□□ -2.06
TPM3P06753 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.19□□□□□ -2.06
TPM3P06753 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.19□□□□□ -2.06
TPM3P06753 Z82210.1-201ENST00000440037 231 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms