Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RPS29P7-201ENST00000439662 171 ntBASIC4.74□□□□□ -1.65
APPP05067 AC234775.1-201ENST00000454247 670 ntBASIC4.74□□□□□ -1.65
APPP05067 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.74□□□□□ -1.65
APPP05067 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.74□□□□□ -1.65
APPP05067 AL163973.1-201ENST00000484753 577 ntBASIC4.74□□□□□ -1.65
APPP05067 VN1R105P-201ENST00000486595 910 ntBASIC4.74□□□□□ -1.65
APPP05067 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
APPP05067 LRRC34P2-201ENST00000514850 553 ntBASIC4.74□□□□□ -1.65
APPP05067 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.74□□□□□ -1.65
APPP05067 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.74□□□□□ -1.65
APPP05067 AC022968.1-201ENST00000567372 442 ntBASIC4.74□□□□□ -1.65
APPP05067 AC015917.1-201ENST00000579654 510 ntBASIC4.74□□□□□ -1.65
APPP05067 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
APPP05067 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.74□□□□□ -1.65
APPP05067 AL356055.1-201ENST00000602528 446 ntBASIC4.74□□□□□ -1.65
APPP05067 AC007687.1-201ENST00000602704 304 ntBASIC4.74□□□□□ -1.65
APPP05067 NRBF2P5-201ENST00000603087 788 ntBASIC4.74□□□□□ -1.65
APPP05067 AL034351.1-201ENST00000605288 668 ntBASIC4.74□□□□□ -1.65
APPP05067 AL391261.4-201ENST00000616012 481 ntBASIC4.74□□□□□ -1.65
APPP05067 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
APPP05067 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.74□□□□□ -1.65
APPP05067 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
APPP05067 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.74□□□□□ -1.65
APPP05067 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.74□□□□□ -1.65
APPP05067 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
APPP05067 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
APPP05067 AL645937.1-201ENST00000641739 1652 ntBASIC4.73□□□□□ -1.65
APPP05067 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
APPP05067 RNU4-48P-201ENST00000365559 182 ntBASIC4.73□□□□□ -1.65
APPP05067 RNU5E-6P-201ENST00000365574 115 ntBASIC4.73□□□□□ -1.65
APPP05067 U1.1-201ENST00000384101 164 ntBASIC4.73□□□□□ -1.65
APPP05067 MIR1250-201ENST00000408098 113 ntBASIC4.73□□□□□ -1.65
APPP05067 SNORA3C-201ENST00000408792 125 ntBASIC4.73□□□□□ -1.65
APPP05067 RPL21P24-201ENST00000413752 448 ntBASIC4.73□□□□□ -1.65
APPP05067 RPL7L1P10-201ENST00000427790 463 ntBASIC4.73□□□□□ -1.65
APPP05067 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.73□□□□□ -1.65
APPP05067 RANP8-201ENST00000444720 713 ntBASIC4.73□□□□□ -1.65
APPP05067 UBE2V1P7-201ENST00000446395 340 ntBASIC4.73□□□□□ -1.65
APPP05067 AL359073.1-201ENST00000448036 403 ntBASIC4.73□□□□□ -1.65
APPP05067 AC010631.1-201ENST00000474150 156 ntBASIC4.73□□□□□ -1.65
APPP05067 AC116562.3-201ENST00000506136 177 ntBASIC4.73□□□□□ -1.65
APPP05067 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.73□□□□□ -1.65
APPP05067 RNU6-1038P-201ENST00000516516 104 ntBASIC4.73□□□□□ -1.65
APPP05067 RN7SKP219-201ENST00000516825 296 ntBASIC4.73□□□□□ -1.65
APPP05067 RNU4-60P-201ENST00000517239 135 ntBASIC4.73□□□□□ -1.65
APPP05067 IGKV2-23-201ENST00000518729 323 ntBASIC4.73□□□□□ -1.65
APPP05067 AC107953.1-201ENST00000522216 297 ntBASIC4.73□□□□□ -1.65
APPP05067 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.73□□□□□ -1.65
APPP05067 AC068587.5-201ENST00000528506 175 ntBASIC4.73□□□□□ -1.65
APPP05067 GNRHR2P1-201ENST00000555315 631 ntBASIC4.73□□□□□ -1.65
APPP05067 MIR4775-201ENST00000581168 75 ntBASIC4.73□□□□□ -1.65
APPP05067 DISC2.1-201ENST00000612827 205 ntBASIC4.73□□□□□ -1.65
APPP05067 TUG1_2.1-201ENST00000614234 87 ntBASIC4.73□□□□□ -1.65
APPP05067 AL603758.1-201ENST00000618654 241 ntBASIC4.73□□□□□ -1.65
APPP05067 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.73□□□□□ -1.65
APPP05067 AL136221.1-201ENST00000621449 509 ntBASIC4.73□□□□□ -1.65
APPP05067 AL353748.2-201ENST00000622148 471 ntBASIC4.73□□□□□ -1.65
APPP05067 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.73□□□□□ -1.65
APPP05067 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.73□□□□□ -1.65
APPP05067 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.73□□□□□ -1.65
APPP05067 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
APPP05067 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
APPP05067 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
APPP05067 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
APPP05067 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
APPP05067 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
APPP05067 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.72□□□□□ -1.65
APPP05067 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
APPP05067 Y_RNA.356-201ENST00000365475 113 ntBASIC4.72□□□□□ -1.65
APPP05067 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.72□□□□□ -1.65
APPP05067 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
APPP05067 RNU6-1029P-201ENST00000384109 107 ntBASIC4.72□□□□□ -1.65
APPP05067 SNORA24.1-201ENST00000384401 135 ntBASIC4.72□□□□□ -1.65
APPP05067 AL162578.1-201ENST00000406202 378 ntBASIC4.72□□□□□ -1.65
APPP05067 RNU2-39P-201ENST00000410604 198 ntBASIC4.72□□□□□ -1.65
APPP05067 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.72□□□□□ -1.65
APPP05067 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.72□□□□□ -1.65
APPP05067 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.72□□□□□ -1.65
APPP05067 MED13P1-201ENST00000428342 171 ntBASIC4.72□□□□□ -1.65
APPP05067 ATP5JP1-201ENST00000431631 322 ntBASIC4.72□□□□□ -1.65
APPP05067 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.72□□□□□ -1.65
APPP05067 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.72□□□□□ -1.65
APPP05067 AL356010.1-201ENST00000456364 102 ntBASIC4.72□□□□□ -1.65
APPP05067 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.72□□□□□ -1.65
APPP05067 RN7SL132P-201ENST00000478131 296 ntBASIC4.72□□□□□ -1.65
APPP05067 RPL21P103-201ENST00000479921 488 ntBASIC4.72□□□□□ -1.65
APPP05067 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.72□□□□□ -1.65
APPP05067 RNU7-51P-201ENST00000516560 62 ntBASIC4.72□□□□□ -1.65
APPP05067 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.72□□□□□ -1.65
APPP05067 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.72□□□□□ -1.65
APPP05067 BNIP3P5-201ENST00000562290 498 ntBASIC4.72□□□□□ -1.65
APPP05067 AC106785.1-201ENST00000565935 262 ntBASIC4.72□□□□□ -1.65
APPP05067 AC018638.8-201ENST00000588755 281 ntBASIC4.72□□□□□ -1.65
APPP05067 AL355812.1-201ENST00000603215 216 ntBASIC4.72□□□□□ -1.65
APPP05067 AL353621.2-201ENST00000605340 133 ntBASIC4.72□□□□□ -1.65
APPP05067 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.72□□□□□ -1.65
APPP05067 AC244100.1-202ENST00000621554 382 ntBASIC4.72□□□□□ -1.65
APPP05067 AP003122.6-201ENST00000623831 495 ntBASIC4.72□□□□□ -1.65
APPP05067 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
APPP05067 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms