| MT1A | P04731 | RNU6-1053P-201 | ENST00000515930 | 101 nt | BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | AC090796.1-201 | ENST00000520370 | 567 nt | TSL 4 BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | CA1-215 | ENST00000522389 | 551 nt | TSL 3 BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | PARPBP-212 | ENST00000543784 | 992 nt | TSL 2 BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | OR4U1P-201 | ENST00000554958 | 912 nt | BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | AC044913.1-201 | ENST00000557200 | 430 nt | BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | AC025918.2-201 | ENST00000558683 | 763 nt | BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | AC026474.1-201 | ENST00000562422 | 428 nt | TSL 2 BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | MIR4299-201 | ENST00000577899 | 72 nt | BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | AC022655.1-201 | ENST00000578039 | 288 nt | TSL 3 BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | AC006116.4-201 | ENST00000589671 | 452 nt | TSL 2 BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | AC100781.1-201 | ENST00000597142 | 383 nt | TSL 3 BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | AP001485.1-201 | ENST00000604799 | 199 nt | BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | BNIP3P10-201 | ENST00000605360 | 577 nt | BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | AL161912.3-201 | ENST00000605404 | 628 nt | BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | AC103810.9-201 | ENST00000606688 | 112 nt | BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | AC012360.2-201 | ENST00000609349 | 391 nt | BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | AL359962.2-201 | ENST00000610044 | 303 nt | TSL 5 BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | AL592148.2-201 | ENST00000612210 | 372 nt | BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | AL590227.1-201 | ENST00000622616 | 315 nt | TSL 5 BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | FP475955.2-201 | ENST00000623720 | 458 nt | TSL 2 BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | AC087521.4-201 | ENST00000637427 | 289 nt | TSL 5 BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | GNPDA2-204 | ENST00000509756 | 5382 nt | APPRIS ALT1 TSL 1 (best) BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | ZBED5-202 | ENST00000432999 | 2741 nt | APPRIS P1 TSL 1 (best) BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | LINC01684-201 | ENST00000415182 | 2176 nt | TSL 1 (best) BASIC | 0.35 | □□□□□ -2.35 | | |
| MT1A | P04731 | NT5C3A-203 | ENST00000396152 | 1788 nt | APPRIS P3 TSL 1 (best) BASIC | 0.34 | □□□□□ -2.35 | | |
| MT1A | P04731 | PCDH11Y-203 | ENST00000362095 | 4220 nt | APPRIS ALT2 TSL 1 (best) BASIC | 0.34 | □□□□□ -2.35 | | |
| MT1A | P04731 | NSRP1P1-201 | ENST00000444067 | 1693 nt | BASIC | 0.34 | □□□□□ -2.35 | | |
| MT1A | P04731 | MIR26B-201 | ENST00000362251 | 77 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | RNA5SP276-201 | ENST00000362580 | 94 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | RNU6-53P-201 | ENST00000365367 | 106 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | RNU6-920P-201 | ENST00000410926 | 92 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AC009411.1-202 | ENST00000412424 | 548 nt | TSL 4 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AP000550.2-201 | ENST00000417463 | 774 nt | TSL 5 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AP000695.2-201 | ENST00000428667 | 715 nt | TSL 5 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AC104653.2-201 | ENST00000435407 | 416 nt | TSL 3 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AC004383.1-201 | ENST00000438135 | 289 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AC124916.1-201 | ENST00000444020 | 547 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | HMGN2P18-201 | ENST00000450680 | 270 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL445488.1-201 | ENST00000457272 | 706 nt | TSL 5 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | RNA5SP310-201 | ENST00000459084 | 116 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | SNORD97-201 | ENST00000459187 | 142 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | RPL31P58-201 | ENST00000469001 | 379 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AC112496.1-201 | ENST00000497961 | 562 nt | TSL 5 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | UBA6-AS1-204 | ENST00000502758 | 547 nt | TSL 4 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | LINC02270-201 | ENST00000505386 | 610 nt | TSL 1 (best) BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AC008885.2-201 | ENST00000509506 | 930 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | TRMT112P2-201 | ENST00000512910 | 132 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AC021736.1-201 | ENST00000521143 | 563 nt | TSL 4 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AC087272.1-201 | ENST00000523624 | 533 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AP002748.2-201 | ENST00000528671 | 348 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AP002340.1-201 | ENST00000529298 | 285 nt | TSL 3 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AC109635.4-202 | ENST00000531666 | 412 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | OR5AL2P-201 | ENST00000532185 | 920 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | IFNG-AS1-201 | ENST00000536914 | 494 nt | TSL 5 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | EMP1-206 | ENST00000537612 | 505 nt | TSL 3 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AC092745.2-201 | ENST00000537764 | 620 nt | TSL 3 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | RRN3P3-201 | ENST00000549207 | 578 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL355773.1-201 | ENST00000554458 | 459 nt | TSL 3 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL121839.1-201 | ENST00000556233 | 1185 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | ST20-203 | ENST00000562759 | 694 nt | APPRIS P1 TSL 2 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | LINC02165-201 | ENST00000563061 | 443 nt | TSL 3 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | BLOC1S6-206 | ENST00000564765 | 706 nt | TSL 4 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AC023824.2-201 | ENST00000566185 | 400 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL109918.3-201 | ENST00000603072 | 338 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL670379.6-201 | ENST00000603753 | 252 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL670379.11-201 | ENST00000604059 | 253 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL670379.10-201 | ENST00000604330 | 253 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AC008162.1-201 | ENST00000604718 | 254 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL670379.1-201 | ENST00000604752 | 252 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | BNIP3P4-201 | ENST00000604946 | 565 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL670379.2-201 | ENST00000604983 | 252 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL670379.5-201 | ENST00000605253 | 252 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL670379.4-201 | ENST00000605279 | 254 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL670379.12-201 | ENST00000605291 | 253 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL670379.8-201 | ENST00000605353 | 252 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL670379.9-201 | ENST00000605428 | 253 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL670379.7-201 | ENST00000605823 | 252 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL590282.1-201 | ENST00000610379 | 1136 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL589994.2-201 | ENST00000621124 | 579 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | AC109454.4-201 | ENST00000623411 | 649 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | OR8K3-202 | ENST00000623845 | 939 nt | APPRIS P1 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | PTP4A2-219 | ENST00000626355 | 606 nt | TSL 5 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | SATB1-AS1-269 | ENST00000630766 | 591 nt | TSL 5 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | OR4G11P-202 | ENST00000642116 | 1414 nt | BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | OR4C15-202 | ENST00000642128 | 951 nt | APPRIS P1 BASIC | 0.34 | □□□□□ -2.36 | | |
| MT1A | P04731 | ZNF518A-210 | ENST00000624776 | 7994 nt | APPRIS P1 TSL 1 (best) BASIC | 0.33 | □□□□□ -2.36 | | |
| MT1A | P04731 | ZNF518A-209 | ENST00000614149 | 7911 nt | APPRIS P1 TSL 5 BASIC | 0.33 | □□□□□ -2.36 | | |
| MT1A | P04731 | RNF6P1-201 | ENST00000444889 | 1784 nt | BASIC | 0.33 | □□□□□ -2.36 | | |
| MT1A | P04731 | RNU1-22P-201 | ENST00000363334 | 158 nt | BASIC | 0.33 | □□□□□ -2.36 | | |
| MT1A | P04731 | SNORA62.1-201 | ENST00000364287 | 154 nt | BASIC | 0.33 | □□□□□ -2.36 | | |
| MT1A | P04731 | CNIH4-201 | ENST00000366856 | 808 nt | APPRIS ALT1 TSL 2 BASIC | 0.33 | □□□□□ -2.36 | | |
| MT1A | P04731 | CFHR2-201 | ENST00000367415 | 1059 nt | APPRIS P2 TSL 1 (best) BASIC | 0.33 | □□□□□ -2.36 | | |
| MT1A | P04731 | SNORA22-201 | ENST00000383907 | 134 nt | BASIC | 0.33 | □□□□□ -2.36 | | |
| MT1A | P04731 | SNORA22C-201 | ENST00000384614 | 134 nt | BASIC | 0.33 | □□□□□ -2.36 | | |
| MT1A | P04731 | BTF3L4P2-201 | ENST00000392798 | 346 nt | BASIC | 0.33 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL512604.1-201 | ENST00000404812 | 257 nt | BASIC | 0.33 | □□□□□ -2.36 | | |
| MT1A | P04731 | MIR1285-1-201 | ENST00000408593 | 84 nt | BASIC | 0.33 | □□□□□ -2.36 | | |
| MT1A | P04731 | AL136133.1-201 | ENST00000413694 | 376 nt | BASIC | 0.33 | □□□□□ -2.36 | | |
| MT1A | P04731 | AC003075.1-202 | ENST00000419382 | 720 nt | TSL 3 BASIC | 0.33 | □□□□□ -2.36 | | |