Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC234778.2-201ENST00000566241 354 ntBASIC3.05□□□□□ -1.92
PDGFBP01127 AC145350.1-201ENST00000567426 208 ntBASIC3.05□□□□□ -1.92
PDGFBP01127 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.05□□□□□ -1.92
PDGFBP01127 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.05□□□□□ -1.92
PDGFBP01127 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.05□□□□□ -1.92
PDGFBP01127 DUXAP4-201ENST00000603046 613 ntBASIC3.05□□□□□ -1.92
PDGFBP01127 AC009039.2-201ENST00000624524 529 ntBASIC3.05□□□□□ -1.92
PDGFBP01127 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.05□□□□□ -1.92
PDGFBP01127 AC022336.2-201ENST00000568966 2538 ntBASIC3.05□□□□□ -1.92
PDGFBP01127 AC010680.1-201ENST00000590024 3590 ntBASIC3.05□□□□□ -1.92
PDGFBP01127 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDGFBP01127 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.04□□□□□ -1.92
PDGFBP01127 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDGFBP01127 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.04□□□□□ -1.92
PDGFBP01127 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.04□□□□□ -1.92
PDGFBP01127 AC011477.1-204ENST00000623416 1325 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.04□□□□□ -1.92
PDGFBP01127 RNU6-1078P-201ENST00000364522 103 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 RNU6-660P-201ENST00000364566 109 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 RNA5SP88-201ENST00000365560 109 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 Y_RNA.548-201ENST00000384656 105 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 MIR514A1-201ENST00000385133 98 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 AC018630.2-202ENST00000422992 927 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.04□□□□□ -1.92
PDGFBP01127 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.04□□□□□ -1.92
PDGFBP01127 CST9LP2-201ENST00000437612 320 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 HMGB1P18-201ENST00000438801 619 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.04□□□□□ -1.92
PDGFBP01127 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.04□□□□□ -1.92
PDGFBP01127 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.04□□□□□ -1.92
PDGFBP01127 AC128713.1-201ENST00000471495 306 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.04□□□□□ -1.92
PDGFBP01127 FCF1P3-201ENST00000496394 590 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.04□□□□□ -1.92
PDGFBP01127 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.04□□□□□ -1.92
PDGFBP01127 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.04□□□□□ -1.92
PDGFBP01127 AC114967.1-201ENST00000504890 259 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 AC010486.2-201ENST00000505572 483 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.04□□□□□ -1.92
PDGFBP01127 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.04□□□□□ -1.92
PDGFBP01127 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PDGFBP01127 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.04□□□□□ -1.92
PDGFBP01127 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 RNU6-1282P-201ENST00000516735 96 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 RNU6-759P-201ENST00000516740 103 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 HMGN1P28-201ENST00000521340 364 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.04□□□□□ -1.92
PDGFBP01127 AL512310.1-201ENST00000548639 172 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 AC125611.2-201ENST00000551907 647 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.04□□□□□ -1.92
PDGFBP01127 AC008015.1-201ENST00000555505 465 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.04□□□□□ -1.92
PDGFBP01127 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.04□□□□□ -1.92
PDGFBP01127 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.04□□□□□ -1.92
PDGFBP01127 AC008751.2-201ENST00000597885 980 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 RPL23AP78-201ENST00000599928 470 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.04□□□□□ -1.92
PDGFBP01127 AC107294.3-201ENST00000609211 526 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 RMST_8.1-201ENST00000610287 165 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.04□□□□□ -1.92
PDGFBP01127 OR5H6-203ENST00000642105 978 ntBASIC3.04□□□□□ -1.92
PDGFBP01127 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PDGFBP01127 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.03□□□□□ -1.92
PDGFBP01127 Y_RNA.18-201ENST00000362461 102 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
PDGFBP01127 Y_RNA.560-201ENST00000384689 102 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 MIR34A-201ENST00000385130 110 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 RPL7P25-201ENST00000404151 721 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.03□□□□□ -1.92
PDGFBP01127 SPA17P1-201ENST00000416656 452 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 TXNL1P1-201ENST00000429528 554 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AL513328.1-201ENST00000446460 224 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.03□□□□□ -1.92
PDGFBP01127 AL133217.1-201ENST00000450980 425 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 ART2BP-201ENST00000453501 499 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 CENPBD1P1-201ENST00000464061 469 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 RPL30P9-201ENST00000465586 330 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AC004263.1-201ENST00000479327 332 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AC021382.1-201ENST00000483523 359 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 RPS3AP22-201ENST00000488297 769 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.03□□□□□ -1.92
PDGFBP01127 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.03□□□□□ -1.92
PDGFBP01127 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.03□□□□□ -1.92
PDGFBP01127 AC024589.1-201ENST00000512207 263 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AC013828.2-201ENST00000532487 235 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AMZ2P1-203ENST00000565833 850 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AC034268.2-201ENST00000571784 482 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AC098826.3-201ENST00000603823 466 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AC097468.3-201ENST00000607956 456 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AC107214.2-201ENST00000608204 634 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AC004832.5-201ENST00000608677 401 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AC004852.3-201ENST00000614131 326 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AL161629.2-201ENST00000615347 275 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AC090132.2-201ENST00000615881 347 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AL031667.3-201ENST00000620124 655 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AC009268.2-201ENST00000621925 457 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 AL356266.1-201ENST00000623311 483 ntBASIC3.03□□□□□ -1.92
PDGFBP01127 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.03□□□□□ -1.92
PDGFBP01127 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.03□□□□□ -1.92
PDGFBP01127 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms