Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.17□□□□□ -1.9
CLPTM1O96005 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CLPTM1O96005 RNU6-517P-201ENST00000384362 110 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLPTM1O96005 RPL21P17-201ENST00000397467 475 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 PTMAP2-201ENST00000397627 327 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 RNU6-712P-201ENST00000410558 100 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.17□□□□□ -1.9
CLPTM1O96005 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.17□□□□□ -1.9
CLPTM1O96005 MRPL50P2-201ENST00000416821 482 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 AC019097.1-201ENST00000424783 735 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 RPS3AP44-201ENST00000425466 790 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 AC093151.1-201ENST00000427711 313 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.17□□□□□ -1.9
CLPTM1O96005 MTND4LP10-201ENST00000435146 291 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 MTND1P4-201ENST00000435196 415 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.17□□□□□ -1.9
CLPTM1O96005 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.17□□□□□ -1.9
CLPTM1O96005 AC008264.1-201ENST00000447612 367 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.17□□□□□ -1.9
CLPTM1O96005 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.17□□□□□ -1.9
CLPTM1O96005 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.17□□□□□ -1.9
CLPTM1O96005 AC055855.1-201ENST00000489563 579 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.17□□□□□ -1.9
CLPTM1O96005 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.17□□□□□ -1.9
CLPTM1O96005 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.17□□□□□ -1.9
CLPTM1O96005 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.17□□□□□ -1.9
CLPTM1O96005 AC107934.1-201ENST00000522215 217 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.17□□□□□ -1.9
CLPTM1O96005 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.17□□□□□ -1.9
CLPTM1O96005 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.17□□□□□ -1.9
CLPTM1O96005 SNORD84-203ENST00000584275 78 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.17□□□□□ -1.9
CLPTM1O96005 BDH2P1-201ENST00000602288 736 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 RNU6-87P-201ENST00000607561 108 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 AC103710.1-201ENST00000610003 901 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 AC109347.2-201ENST00000610220 349 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 BX664608.1-201ENST00000610519 487 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLPTM1O96005 AC002550.2-201ENST00000621246 394 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 AC138649.3-201ENST00000622154 254 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 AC091953.2-201ENST00000623979 160 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 AL159972.1-201ENST00000625150 448 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 PISRT1-201ENST00000626175 531 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.17□□□□□ -1.9
CLPTM1O96005 AC099654.12-201ENST00000639868 649 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 MTND5P7-201ENST00000413558 1798 ntBASIC3.17□□□□□ -1.9
CLPTM1O96005 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.17□□□□□ -1.9
CLPTM1O96005 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLPTM1O96005 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLPTM1O96005 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLPTM1O96005 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLPTM1O96005 FARSBP1-201ENST00000435808 1778 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 RNA5SP51-201ENST00000364750 119 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 RNY4P16-201ENST00000364768 94 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 AL359837.1-201ENST00000381357 287 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CLPTM1O96005 RNU6-837P-201ENST00000391056 108 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 SNORA48.7-201ENST00000391302 135 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 RNU6-1077P-201ENST00000410506 102 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 ELOCP17-201ENST00000414751 326 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPTM1O96005 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPTM1O96005 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPTM1O96005 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPTM1O96005 C8orf59P1-201ENST00000429930 303 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.16□□□□□ -1.9
CLPTM1O96005 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPTM1O96005 OR4K11P-201ENST00000431829 904 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 AC104850.1-201ENST00000435940 476 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 UBE2V1P13-201ENST00000436983 439 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 ARPC3P1-201ENST00000437218 533 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPTM1O96005 TPT1P14-201ENST00000448018 505 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 snoU13.24-201ENST00000458998 104 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 RPS26P21-201ENST00000475397 348 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPTM1O96005 AC105252.1-201ENST00000503089 286 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.16□□□□□ -1.9
CLPTM1O96005 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.16□□□□□ -1.9
CLPTM1O96005 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.16□□□□□ -1.9
CLPTM1O96005 RNU6-798P-201ENST00000516912 103 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 SNORA31.26-201ENST00000517250 137 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.16□□□□□ -1.9
CLPTM1O96005 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPTM1O96005 OR4K8P-201ENST00000578842 1048 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 MIR3118-1-201ENST00000581787 76 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 AC068790.3-201ENST00000602988 553 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPTM1O96005 AC107304.1-201ENST00000604229 296 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 AC011451.2-201ENST00000604303 598 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 AL031176.1-201ENST00000604554 466 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 AC245389.1-201ENST00000605141 529 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.16□□□□□ -1.9
CLPTM1O96005 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CLPTM1O96005 AL356585.4-201ENST00000623078 1229 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 AC068880.5-201ENST00000624331 290 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 OR5AK4P-201ENST00000635912 903 ntBASIC3.16□□□□□ -1.9
CLPTM1O96005 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.16□□□□□ -1.9
CLPTM1O96005 AL365440.1-201ENST00000436135 2167 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms