Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 EEF1B2P7-201ENST00000451177 676 ntBASIC1.2□□□□□ -2.22
SIX6O95475 AC027575.1-201ENST00000481064 460 ntBASIC1.2□□□□□ -2.22
SIX6O95475 TPT1P8-201ENST00000510120 555 ntBASIC1.2□□□□□ -2.22
SIX6O95475 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.2□□□□□ -2.22
SIX6O95475 SCARNA11.3-201ENST00000517276 130 ntBASIC1.2□□□□□ -2.22
SIX6O95475 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.2□□□□□ -2.22
SIX6O95475 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.2□□□□□ -2.22
SIX6O95475 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.2□□□□□ -2.22
SIX6O95475 AC008269.2-201ENST00000561915 1105 ntBASIC1.2□□□□□ -2.22
SIX6O95475 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.2□□□□□ -2.22
SIX6O95475 AL392048.1-201ENST00000613946 534 ntBASIC1.2□□□□□ -2.22
SIX6O95475 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.2□□□□□ -2.22
SIX6O95475 MKKS-204ENST00000639674 192 ntBASIC1.2□□□□□ -2.22
SIX6O95475 AC104454.1-201ENST00000421341 1401 ntBASIC1.2□□□□□ -2.22
SIX6O95475 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SIX6O95475 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
SIX6O95475 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.19□□□□□ -2.22
SIX6O95475 AL356432.1-201ENST00000405809 419 ntBASIC1.19□□□□□ -2.22
SIX6O95475 RNU6-1328P-201ENST00000410938 106 ntBASIC1.19□□□□□ -2.22
SIX6O95475 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.19□□□□□ -2.22
SIX6O95475 RPS7P9-201ENST00000414704 586 ntBASIC1.19□□□□□ -2.22
SIX6O95475 UBE2FP1-201ENST00000416536 447 ntBASIC1.19□□□□□ -2.22
SIX6O95475 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.19□□□□□ -2.22
SIX6O95475 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.19□□□□□ -2.22
SIX6O95475 AMD1P1-201ENST00000457220 922 ntBASIC1.19□□□□□ -2.22
SIX6O95475 RNU6-420P-201ENST00000458780 107 ntBASIC1.19□□□□□ -2.22
SIX6O95475 RPL31P60-201ENST00000478450 367 ntBASIC1.19□□□□□ -2.22
SIX6O95475 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.19□□□□□ -2.22
SIX6O95475 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.19□□□□□ -2.22
SIX6O95475 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.19□□□□□ -2.22
SIX6O95475 AC025459.1-201ENST00000504072 156 ntBASIC1.19□□□□□ -2.22
SIX6O95475 AC021146.2-201ENST00000504736 556 ntBASIC1.19□□□□□ -2.22
SIX6O95475 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.19□□□□□ -2.22
SIX6O95475 AC093770.1-201ENST00000511559 571 ntBASIC1.19□□□□□ -2.22
SIX6O95475 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.19□□□□□ -2.22
SIX6O95475 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.19□□□□□ -2.22
SIX6O95475 SNORA31.13-201ENST00000516624 135 ntBASIC1.19□□□□□ -2.22
SIX6O95475 RNU6-250P-201ENST00000516958 103 ntBASIC1.19□□□□□ -2.22
SIX6O95475 SNORA48.10-201ENST00000516965 160 ntBASIC1.19□□□□□ -2.22
SIX6O95475 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
SIX6O95475 AC103783.1-201ENST00000520506 373 ntBASIC1.19□□□□□ -2.22
SIX6O95475 AP005597.4-201ENST00000526762 229 ntBASIC1.19□□□□□ -2.22
SIX6O95475 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.19□□□□□ -2.22
SIX6O95475 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.19□□□□□ -2.22
SIX6O95475 MIR4299-201ENST00000577899 72 ntBASIC1.19□□□□□ -2.22
SIX6O95475 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
SIX6O95475 AC093673.2-201ENST00000609674 331 ntBASIC1.19□□□□□ -2.22
SIX6O95475 AC040168.1-201ENST00000623594 991 ntBASIC1.19□□□□□ -2.22
SIX6O95475 HPVC1-201ENST00000629899 1198 ntBASIC1.19□□□□□ -2.22
SIX6O95475 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.19□□□□□ -2.22
SIX6O95475 AC111188.2-201ENST00000529697 1387 ntBASIC1.19□□□□□ -2.22
SIX6O95475 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.18□□□□□ -2.22
SIX6O95475 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.18□□□□□ -2.22
SIX6O95475 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SIX6O95475 RNA5SP27-201ENST00000363839 119 ntBASIC1.18□□□□□ -2.22
SIX6O95475 SNORA23-201ENST00000365128 182 ntBASIC1.18□□□□□ -2.22
SIX6O95475 Y_RNA.333-201ENST00000365274 102 ntBASIC1.18□□□□□ -2.22
SIX6O95475 OR9R1P-201ENST00000412200 877 ntBASIC1.18□□□□□ -2.22
SIX6O95475 AL139415.2-201ENST00000431968 163 ntBASIC1.18□□□□□ -2.22
SIX6O95475 HMGB1P18-201ENST00000438801 619 ntBASIC1.18□□□□□ -2.22
SIX6O95475 AL353689.1-201ENST00000438895 199 ntBASIC1.18□□□□□ -2.22
SIX6O95475 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.18□□□□□ -2.22
SIX6O95475 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.18□□□□□ -2.22
SIX6O95475 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.18□□□□□ -2.22
SIX6O95475 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SIX6O95475 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.18□□□□□ -2.22
SIX6O95475 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.18□□□□□ -2.22
SIX6O95475 AC112518.2-201ENST00000508565 425 ntBASIC1.18□□□□□ -2.22
SIX6O95475 RNU6-202P-201ENST00000515998 96 ntBASIC1.18□□□□□ -2.22
SIX6O95475 RNU6-798P-201ENST00000516912 103 ntBASIC1.18□□□□□ -2.22
SIX6O95475 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.18□□□□□ -2.22
SIX6O95475 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.18□□□□□ -2.22
SIX6O95475 C1DP5-201ENST00000525775 383 ntBASIC1.18□□□□□ -2.22
SIX6O95475 AK6P1-201ENST00000540219 478 ntBASIC1.18□□□□□ -2.22
SIX6O95475 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.18□□□□□ -2.22
SIX6O95475 AC103710.2-201ENST00000609912 942 ntBASIC1.18□□□□□ -2.22
SIX6O95475 AC010872.1-201ENST00000624225 675 ntBASIC1.18□□□□□ -2.22
SIX6O95475 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.18□□□□□ -2.22
SIX6O95475 AC068620.4-201ENST00000636730 1182 ntBASIC1.18□□□□□ -2.22
SIX6O95475 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SIX6O95475 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.18□□□□□ -2.22
SIX6O95475 AC010329.5-201ENST00000623497 2174 ntBASIC1.17□□□□□ -2.22
SIX6O95475 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
SIX6O95475 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SIX6O95475 RNU1-148P-201ENST00000384472 162 ntBASIC1.17□□□□□ -2.22
SIX6O95475 RNU6-1035P-201ENST00000384477 107 ntBASIC1.17□□□□□ -2.22
SIX6O95475 RNU2-41P-201ENST00000410991 178 ntBASIC1.17□□□□□ -2.22
SIX6O95475 RNA5SP450-201ENST00000411206 102 ntBASIC1.17□□□□□ -2.22
SIX6O95475 AL109913.1-201ENST00000421173 514 ntBASIC1.17□□□□□ -2.22
SIX6O95475 AL354695.1-201ENST00000427935 228 ntBASIC1.17□□□□□ -2.22
SIX6O95475 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.17□□□□□ -2.22
SIX6O95475 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SIX6O95475 snoU109.1-201ENST00000459339 135 ntBASIC1.17□□□□□ -2.22
SIX6O95475 RPL30P9-201ENST00000465586 330 ntBASIC1.17□□□□□ -2.22
SIX6O95475 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.17□□□□□ -2.22
SIX6O95475 AC104564.1-201ENST00000493028 407 ntBASIC1.17□□□□□ -2.22
SIX6O95475 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.17□□□□□ -2.22
SIX6O95475 AC011352.3-201ENST00000505162 593 ntBASIC1.17□□□□□ -2.22
SIX6O95475 SUMO2P6-201ENST00000505273 288 ntBASIC1.17□□□□□ -2.22
SIX6O95475 AC104108.1-201ENST00000509930 412 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms