Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RTN3O95197 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.59□□□□□ -1.83
RTN3O95197 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.59□□□□□ -1.83
RTN3O95197 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.59□□□□□ -1.83
RTN3O95197 MIR3200-201ENST00000580767 85 ntBASIC3.59□□□□□ -1.83
RTN3O95197 MIR3118-1-201ENST00000581787 76 ntBASIC3.59□□□□□ -1.83
RTN3O95197 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.59□□□□□ -1.83
RTN3O95197 OR2AS2P-201ENST00000606902 342 ntBASIC3.59□□□□□ -1.83
RTN3O95197 AC096577.2-201ENST00000611455 153 ntBASIC3.59□□□□□ -1.83
RTN3O95197 AL138880.2-201ENST00000616214 239 ntBASIC3.59□□□□□ -1.83
RTN3O95197 AC108479.2-201ENST00000617314 601 ntBASIC3.59□□□□□ -1.83
RTN3O95197 AC022149.2-201ENST00000621061 203 ntBASIC3.59□□□□□ -1.83
RTN3O95197 AC091953.2-201ENST00000623979 160 ntBASIC3.59□□□□□ -1.83
RTN3O95197 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RTN3O95197 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
RTN3O95197 ELL2P3-201ENST00000457883 1602 ntBASIC3.59□□□□□ -1.84
RTN3O95197 FAM35BP-202ENST00000497389 3337 ntBASIC3.59□□□□□ -1.84
RTN3O95197 AC007785.2-201ENST00000598627 1916 ntBASIC3.58□□□□□ -1.84
RTN3O95197 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTN3O95197 FGF7P2-201ENST00000332473 296 ntBASIC3.58□□□□□ -1.84
RTN3O95197 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
RTN3O95197 RNY4P16-201ENST00000364768 94 ntBASIC3.58□□□□□ -1.84
RTN3O95197 RNY3P10-201ENST00000384764 102 ntBASIC3.58□□□□□ -1.84
RTN3O95197 U3.19-201ENST00000390893 196 ntBASIC3.58□□□□□ -1.84
RTN3O95197 MRPL42P2-201ENST00000403169 426 ntBASIC3.58□□□□□ -1.84
RTN3O95197 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.58□□□□□ -1.84
RTN3O95197 SPA17P1-201ENST00000416656 452 ntBASIC3.58□□□□□ -1.84
RTN3O95197 AC093156.1-201ENST00000440382 670 ntBASIC3.58□□□□□ -1.84
RTN3O95197 TAF9P1-201ENST00000445421 515 ntBASIC3.58□□□□□ -1.84
RTN3O95197 AC020550.1-201ENST00000447385 163 ntBASIC3.58□□□□□ -1.84
RTN3O95197 AC009961.3-201ENST00000449832 765 ntBASIC3.58□□□□□ -1.84
RTN3O95197 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.58□□□□□ -1.84
RTN3O95197 SSXP1-201ENST00000453640 473 ntBASIC3.58□□□□□ -1.84
RTN3O95197 TAF9P2-201ENST00000454958 515 ntBASIC3.58□□□□□ -1.84
RTN3O95197 MTND1P12-201ENST00000455231 147 ntBASIC3.58□□□□□ -1.84
RTN3O95197 RNA5SP269-201ENST00000459032 137 ntBASIC3.58□□□□□ -1.84
RTN3O95197 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.58□□□□□ -1.84
RTN3O95197 AC006445.2-201ENST00000510061 472 ntBASIC3.58□□□□□ -1.84
RTN3O95197 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.58□□□□□ -1.84
RTN3O95197 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
RTN3O95197 SNORA31.1-201ENST00000515993 133 ntBASIC3.58□□□□□ -1.84
RTN3O95197 SNORA31.5-201ENST00000516190 133 ntBASIC3.58□□□□□ -1.84
RTN3O95197 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.58□□□□□ -1.84
RTN3O95197 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RTN3O95197 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.58□□□□□ -1.84
RTN3O95197 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.58□□□□□ -1.84
RTN3O95197 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.58□□□□□ -1.84
RTN3O95197 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.58□□□□□ -1.84
RTN3O95197 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.58□□□□□ -1.84
RTN3O95197 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.58□□□□□ -1.84
RTN3O95197 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.58□□□□□ -1.84
RTN3O95197 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.58□□□□□ -1.84
RTN3O95197 BNIP3P8-201ENST00000597863 560 ntBASIC3.58□□□□□ -1.84
RTN3O95197 AC110760.3-201ENST00000598794 467 ntBASIC3.58□□□□□ -1.84
RTN3O95197 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.58□□□□□ -1.84
RTN3O95197 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.58□□□□□ -1.84
RTN3O95197 AC110801.1-201ENST00000623590 212 ntBASIC3.58□□□□□ -1.84
RTN3O95197 AC099654.13-201ENST00000639774 207 ntBASIC3.58□□□□□ -1.84
RTN3O95197 OR5H6-203ENST00000642105 978 ntBASIC3.58□□□□□ -1.84
RTN3O95197 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
RTN3O95197 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTN3O95197 AC093908.1-201ENST00000623125 8092 ntBASIC3.58□□□□□ -1.84
RTN3O95197 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.58□□□□□ -1.84
RTN3O95197 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.58□□□□□ -1.84
RTN3O95197 AC004972.1-201ENST00000623934 2209 ntBASIC3.58□□□□□ -1.84
RTN3O95197 AC073073.2-201ENST00000609827 2578 ntBASIC3.57□□□□□ -1.84
RTN3O95197 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RTN3O95197 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
RTN3O95197 Z83843.1-201ENST00000604070 3685 ntBASIC3.57□□□□□ -1.84
RTN3O95197 MIR148B-201ENST00000362252 99 ntBASIC3.57□□□□□ -1.84
RTN3O95197 U3.4-201ENST00000363352 213 ntBASIC3.57□□□□□ -1.84
RTN3O95197 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
RTN3O95197 AL136116.1-201ENST00000403591 381 ntBASIC3.57□□□□□ -1.84
RTN3O95197 RNA5SP31-201ENST00000411144 127 ntBASIC3.57□□□□□ -1.84
RTN3O95197 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.57□□□□□ -1.84
RTN3O95197 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.57□□□□□ -1.84
RTN3O95197 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.57□□□□□ -1.84
RTN3O95197 AC019097.1-201ENST00000424783 735 ntBASIC3.57□□□□□ -1.84
RTN3O95197 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.57□□□□□ -1.84
RTN3O95197 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.57□□□□□ -1.84
RTN3O95197 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.57□□□□□ -1.84
RTN3O95197 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.57□□□□□ -1.84
RTN3O95197 HIGD1AP11-201ENST00000438361 280 ntBASIC3.57□□□□□ -1.84
RTN3O95197 MTATP6P26-201ENST00000445926 662 ntBASIC3.57□□□□□ -1.84
RTN3O95197 GAPDHP27-201ENST00000447427 1020 ntBASIC3.57□□□□□ -1.84
RTN3O95197 AC140076.1-201ENST00000449897 361 ntBASIC3.57□□□□□ -1.84
RTN3O95197 RPL23AP67-201ENST00000465341 474 ntBASIC3.57□□□□□ -1.84
RTN3O95197 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.57□□□□□ -1.84
RTN3O95197 RN7SL283P-201ENST00000489055 303 ntBASIC3.57□□□□□ -1.84
RTN3O95197 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.57□□□□□ -1.84
RTN3O95197 APOOP4-201ENST00000513530 597 ntBASIC3.57□□□□□ -1.84
RTN3O95197 AC114797.1-201ENST00000514003 728 ntBASIC3.57□□□□□ -1.84
RTN3O95197 RNA5SP291-201ENST00000517222 105 ntBASIC3.57□□□□□ -1.84
RTN3O95197 RNU6-711P-201ENST00000517255 106 ntBASIC3.57□□□□□ -1.84
RTN3O95197 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.57□□□□□ -1.84
RTN3O95197 ATP5F1P5-201ENST00000526403 760 ntBASIC3.57□□□□□ -1.84
RTN3O95197 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RTN3O95197 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.57□□□□□ -1.84
RTN3O95197 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.57□□□□□ -1.84
RTN3O95197 RPL21P5-201ENST00000554662 472 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms