Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC008993.2-201ENST00000631744 806 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.86□□□□□ -1.95
SDC3O75056 MIR4275-201ENST00000636486 87 ntBASIC2.86□□□□□ -1.95
SDC3O75056 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SDC3O75056 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.86□□□□□ -1.95
SDC3O75056 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SDC3O75056 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.85□□□□□ -1.95
SDC3O75056 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.85□□□□□ -1.95
SDC3O75056 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
SDC3O75056 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SDC3O75056 OR4G2P-202ENST00000641004 1759 ntBASIC2.85□□□□□ -1.95
SDC3O75056 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SDC3O75056 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SDC3O75056 AC062016.1-201ENST00000355719 319 ntBASIC2.85□□□□□ -1.95
SDC3O75056 RNA5SP139-201ENST00000364340 117 ntBASIC2.85□□□□□ -1.95
SDC3O75056 RNU6-1078P-201ENST00000364522 103 ntBASIC2.85□□□□□ -1.95
SDC3O75056 RNA5SP88-201ENST00000365560 109 ntBASIC2.85□□□□□ -1.95
SDC3O75056 U8.9-201ENST00000365667 134 ntBASIC2.85□□□□□ -1.95
SDC3O75056 SNORA26.7-201ENST00000391288 122 ntBASIC2.85□□□□□ -1.95
SDC3O75056 RNA5SP184-201ENST00000411071 108 ntBASIC2.85□□□□□ -1.95
SDC3O75056 OR2AS1P-201ENST00000427827 319 ntBASIC2.85□□□□□ -1.95
SDC3O75056 UBE2FP3-201ENST00000436366 524 ntBASIC2.85□□□□□ -1.95
SDC3O75056 AL117351.1-201ENST00000438864 766 ntBASIC2.85□□□□□ -1.95
SDC3O75056 MTCYBP3-201ENST00000445588 1137 ntBASIC2.85□□□□□ -1.95
SDC3O75056 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.85□□□□□ -1.95
SDC3O75056 ARL4AP2-201ENST00000507378 601 ntBASIC2.85□□□□□ -1.95
SDC3O75056 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.85□□□□□ -1.95
SDC3O75056 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.85□□□□□ -1.95
SDC3O75056 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.85□□□□□ -1.95
SDC3O75056 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.85□□□□□ -1.95
SDC3O75056 AC068587.4-201ENST00000533893 186 ntBASIC2.85□□□□□ -1.95
SDC3O75056 AC079600.2-201ENST00000550076 130 ntBASIC2.85□□□□□ -1.95
SDC3O75056 SETP2-201ENST00000553886 926 ntBASIC2.85□□□□□ -1.95
SDC3O75056 AC090888.2-201ENST00000559765 1144 ntBASIC2.85□□□□□ -1.95
SDC3O75056 ACTR3BP3-201ENST00000565577 979 ntBASIC2.85□□□□□ -1.95
SDC3O75056 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.85□□□□□ -1.95
SDC3O75056 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.85□□□□□ -1.95
SDC3O75056 MIR3162-201ENST00000581818 82 ntBASIC2.85□□□□□ -1.95
SDC3O75056 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.85□□□□□ -1.95
SDC3O75056 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.85□□□□□ -1.95
SDC3O75056 NRBF2P5-201ENST00000603087 788 ntBASIC2.85□□□□□ -1.95
SDC3O75056 AC079395.3-201ENST00000615161 484 ntBASIC2.85□□□□□ -1.95
SDC3O75056 AC009268.2-201ENST00000621925 457 ntBASIC2.85□□□□□ -1.95
SDC3O75056 AP000676.4-201ENST00000624659 623 ntBASIC2.85□□□□□ -1.95
SDC3O75056 AC084035.1-201ENST00000634543 607 ntBASIC2.85□□□□□ -1.95
SDC3O75056 AC091564.4-201ENST00000533934 2194 ntBASIC2.85□□□□□ -1.95
SDC3O75056 AC004944.1-201ENST00000517807 3059 ntBASIC2.85□□□□□ -1.95
SDC3O75056 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SDC3O75056 SDAD1P2-201ENST00000441308 2028 ntBASIC2.85□□□□□ -1.95
SDC3O75056 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SDC3O75056 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
SDC3O75056 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SDC3O75056 AC009902.3-201ENST00000606235 2172 ntBASIC2.84□□□□□ -1.95
SDC3O75056 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SDC3O75056 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SDC3O75056 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SDC3O75056 RNU5E-8P-201ENST00000363502 116 ntBASIC2.84□□□□□ -1.95
SDC3O75056 SNORA9.2-201ENST00000365361 133 ntBASIC2.84□□□□□ -1.95
SDC3O75056 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.84□□□□□ -1.95
SDC3O75056 RNU6-637P-201ENST00000384050 107 ntBASIC2.84□□□□□ -1.95
SDC3O75056 RNU6-1200P-201ENST00000384162 107 ntBASIC2.84□□□□□ -1.95
SDC3O75056 MIR514A1-201ENST00000385133 98 ntBASIC2.84□□□□□ -1.95
SDC3O75056 MIR325-201ENST00000385260 98 ntBASIC2.84□□□□□ -1.95
SDC3O75056 U3.20-201ENST00000390909 217 ntBASIC2.84□□□□□ -1.95
SDC3O75056 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SDC3O75056 NUP35P1-201ENST00000422734 947 ntBASIC2.84□□□□□ -1.95
SDC3O75056 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.84□□□□□ -1.95
SDC3O75056 UBE2V1P13-201ENST00000436983 439 ntBASIC2.84□□□□□ -1.95
SDC3O75056 AL354941.1-201ENST00000438600 464 ntBASIC2.84□□□□□ -1.95
SDC3O75056 RPL21P2-201ENST00000440049 481 ntBASIC2.84□□□□□ -1.95
SDC3O75056 AL591719.1-201ENST00000444669 744 ntBASIC2.84□□□□□ -1.95
SDC3O75056 COX6CP2-201ENST00000444980 225 ntBASIC2.84□□□□□ -1.95
SDC3O75056 AC092798.1-201ENST00000458542 409 ntBASIC2.84□□□□□ -1.95
SDC3O75056 snoU13.28-201ENST00000459235 104 ntBASIC2.84□□□□□ -1.95
SDC3O75056 AC106872.3-201ENST00000495104 446 ntBASIC2.84□□□□□ -1.95
SDC3O75056 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.84□□□□□ -1.95
SDC3O75056 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.84□□□□□ -1.95
SDC3O75056 RAC1P5-201ENST00000512182 576 ntBASIC2.84□□□□□ -1.95
SDC3O75056 AC112673.1-201ENST00000513168 575 ntBASIC2.84□□□□□ -1.95
SDC3O75056 RNU6-928P-201ENST00000516876 104 ntBASIC2.84□□□□□ -1.95
SDC3O75056 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.84□□□□□ -1.95
SDC3O75056 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.84□□□□□ -1.95
SDC3O75056 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.84□□□□□ -1.95
SDC3O75056 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.84□□□□□ -1.95
SDC3O75056 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.84□□□□□ -1.95
SDC3O75056 ISCA1P3-201ENST00000577104 373 ntBASIC2.84□□□□□ -1.95
SDC3O75056 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.84□□□□□ -1.95
SDC3O75056 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.84□□□□□ -1.95
SDC3O75056 AC024153.1-201ENST00000603103 365 ntBASIC2.84□□□□□ -1.95
SDC3O75056 AC090132.2-201ENST00000615881 347 ntBASIC2.84□□□□□ -1.95
SDC3O75056 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.84□□□□□ -1.95
SDC3O75056 AL607023.1-201ENST00000620045 248 ntBASIC2.84□□□□□ -1.95
SDC3O75056 AL356596.1-201ENST00000624230 379 ntBASIC2.84□□□□□ -1.95
SDC3O75056 PCMTD1P7-201ENST00000634506 357 ntBASIC2.84□□□□□ -1.95
SDC3O75056 IGHVIII-44-202ENST00000636235 289 ntBASIC2.84□□□□□ -1.95
SDC3O75056 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.84□□□□□ -1.95
SDC3O75056 OR5H6-203ENST00000642105 978 ntBASIC2.84□□□□□ -1.95
SDC3O75056 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
SDC3O75056 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
SDC3O75056 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms