Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM13O60858 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM13O60858 AC007016.1-201ENST00000512110 244 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 SCARNA16.2-201ENST00000516520 172 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 RNU6-111P-201ENST00000517179 105 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 RNU1-54P-201ENST00000517181 120 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 AC022868.1-201ENST00000517767 391 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 AC021006.3-201ENST00000530771 192 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 DYNLL1P4-201ENST00000549314 266 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM13O60858 AL110118.1-201ENST00000553543 400 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 HSBP1P1-201ENST00000555205 166 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 MIR4489-201ENST00000578869 62 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM13O60858 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.44□□□□□ -1.7
TRIM13O60858 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM13O60858 MIR4302-201ENST00000638058 60 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM13O60858 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM13O60858 OR51H2P-202ENST00000641424 3046 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TRIM13O60858 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM13O60858 MTCO1P24-201ENST00000515438 1558 ntBASIC4.44□□□□□ -1.7
TRIM13O60858 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TRIM13O60858 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TRIM13O60858 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM13O60858 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM13O60858 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM13O60858 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM13O60858 BRAFP1-201ENST00000445336 2703 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM13O60858 RNA5SP307-201ENST00000362863 116 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 Y_RNA.150-201ENST00000363562 102 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.43□□□□□ -1.7
TRIM13O60858 MIR19A-201ENST00000384878 82 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 RNA5SP219-201ENST00000390940 113 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 RNU4-46P-201ENST00000410818 138 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 EIF4A1P3-201ENST00000411521 244 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 AC079355.1-201ENST00000421770 223 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 AL355433.1-201ENST00000422804 300 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM13O60858 AL606753.1-201ENST00000427435 87 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 AC016831.4-201ENST00000438302 307 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 HIGD1AP11-201ENST00000438361 280 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 AC099799.1-201ENST00000439809 192 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 AC011816.1-201ENST00000441346 546 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM13O60858 RPL7P5-201ENST00000471472 736 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 AC008953.1-201ENST00000497334 318 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM13O60858 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM13O60858 RNU2-10P-201ENST00000516375 211 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 RNA5SP384-201ENST00000516615 116 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM13O60858 AC024224.1-201ENST00000538284 609 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM13O60858 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.43□□□□□ -1.7
TRIM13O60858 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM13O60858 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM13O60858 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM13O60858 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM13O60858 AL445363.3-201ENST00000623080 671 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 AP000843.1-201ENST00000624880 701 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
TRIM13O60858 U6.104-201ENST00000637979 90 ntBASIC4.43□□□□□ -1.7
TRIM13O60858 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM13O60858 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM13O60858 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
TRIM13O60858 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM13O60858 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
TRIM13O60858 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM13O60858 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM13O60858 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
TRIM13O60858 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
TRIM13O60858 OR56A5-201ENST00000340110 738 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM13O60858 RNA5SP191-201ENST00000362585 102 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 RNU6-97P-201ENST00000363387 104 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 RNU6-662P-201ENST00000384253 104 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TRIM13O60858 SDHCP2-201ENST00000398565 501 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 AC110754.1-201ENST00000399740 601 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 RPL31P2-201ENST00000413849 377 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM13O60858 RPS15AP40-201ENST00000419621 391 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 MRPS18CP6-201ENST00000423587 223 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 AL590632.1-201ENST00000424289 371 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 RPL7P46-201ENST00000425129 740 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM13O60858 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM13O60858 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM13O60858 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM13O60858 AC006967.1-201ENST00000467608 589 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM13O60858 RN7SL727P-201ENST00000482164 296 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 AC021382.1-201ENST00000483523 359 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 AC006499.3-201ENST00000506077 748 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 AC006499.6-201ENST00000511169 607 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms