Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SSXP1-201ENST00000453640 473 ntBASIC3.03□□□□□ -1.92
SNX3O60493 SNRPFP4-201ENST00000456366 242 ntBASIC3.03□□□□□ -1.92
SNX3O60493 RPL31P3-201ENST00000458430 332 ntBASIC3.03□□□□□ -1.92
SNX3O60493 RPL23AP11-201ENST00000475260 469 ntBASIC3.03□□□□□ -1.92
SNX3O60493 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX3O60493 MTND1P3-201ENST00000484956 952 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AC117522.2-201ENST00000510049 657 ntBASIC3.03□□□□□ -1.92
SNX3O60493 RN7SKP18-201ENST00000516005 275 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AC100870.1-201ENST00000522035 505 ntBASIC3.03□□□□□ -1.92
SNX3O60493 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX3O60493 OR8R1P-201ENST00000543943 764 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AC124947.2-202ENST00000552735 133 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX3O60493 RPL23AP84-201ENST00000571193 464 ntBASIC3.03□□□□□ -1.92
SNX3O60493 MIR5685-201ENST00000579080 79 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX3O60493 CKS1BP3-201ENST00000600888 237 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AC073544.2-201ENST00000601155 540 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AP000860.1-201ENST00000605250 559 ntBASIC3.03□□□□□ -1.92
SNX3O60493 SNORA51-201ENST00000606420 132 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AC135507.1-201ENST00000607214 561 ntBASIC3.03□□□□□ -1.92
SNX3O60493 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX3O60493 AC068831.7-201ENST00000616954 363 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AC002076.2-201ENST00000617362 122 ntBASIC3.03□□□□□ -1.92
SNX3O60493 SNHG22-203ENST00000617833 660 ntBASIC3.03□□□□□ -1.92
SNX3O60493 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AC006338.1-201ENST00000618453 749 ntBASIC3.03□□□□□ -1.92
SNX3O60493 AC092447.7-201ENST00000422212 1621 ntBASIC3.03□□□□□ -1.92
SNX3O60493 CUL1P1-201ENST00000509510 2425 ntBASIC3.03□□□□□ -1.92
SNX3O60493 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SNX3O60493 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SNX3O60493 GABRG2-229ENST00000641017 3628 ntBASIC3.02□□□□□ -1.93
SNX3O60493 FAM35BP-202ENST00000497389 3337 ntBASIC3.02□□□□□ -1.93
SNX3O60493 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SNX3O60493 OR1S2-201ENST00000302592 978 ntBASIC3.02□□□□□ -1.93
SNX3O60493 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX3O60493 U8.9-201ENST00000365667 134 ntBASIC3.02□□□□□ -1.93
SNX3O60493 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX3O60493 SNORA40.3-201ENST00000390964 122 ntBASIC3.02□□□□□ -1.93
SNX3O60493 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SNX3O60493 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX3O60493 FAT1P1-201ENST00000406588 507 ntBASIC3.02□□□□□ -1.93
SNX3O60493 RNU6-628P-201ENST00000410675 107 ntBASIC3.02□□□□□ -1.93
SNX3O60493 RPS15AP12-201ENST00000419498 388 ntBASIC3.02□□□□□ -1.93
SNX3O60493 AL451054.2-201ENST00000420896 202 ntBASIC3.02□□□□□ -1.93
SNX3O60493 TMEM167AP1-201ENST00000423409 219 ntBASIC3.02□□□□□ -1.93
SNX3O60493 AC019097.1-201ENST00000424783 735 ntBASIC3.02□□□□□ -1.93
SNX3O60493 AL589872.1-201ENST00000426602 288 ntBASIC3.02□□□□□ -1.93
SNX3O60493 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX3O60493 SNRPEP4-201ENST00000435815 279 ntBASIC3.02□□□□□ -1.93
SNX3O60493 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX3O60493 MTCO2P16-201ENST00000436962 677 ntBASIC3.02□□□□□ -1.93
SNX3O60493 AC122718.1-201ENST00000439448 744 ntBASIC3.02□□□□□ -1.93
SNX3O60493 MTND6P13-201ENST00000443510 523 ntBASIC3.02□□□□□ -1.93
SNX3O60493 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX3O60493 AC009237.8-201ENST00000445492 379 ntBASIC3.02□□□□□ -1.93
SNX3O60493 ST13P20-201ENST00000447996 1065 ntBASIC3.02□□□□□ -1.93
SNX3O60493 PDSS1P2-201ENST00000449397 678 ntBASIC3.02□□□□□ -1.93
SNX3O60493 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX3O60493 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX3O60493 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.02□□□□□ -1.93
SNX3O60493 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX3O60493 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.02□□□□□ -1.93
SNX3O60493 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX3O60493 HIGD1AP1-201ENST00000550979 275 ntBASIC3.02□□□□□ -1.93
SNX3O60493 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX3O60493 AC007224.1-201ENST00000564410 144 ntBASIC3.02□□□□□ -1.93
SNX3O60493 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.02□□□□□ -1.93
SNX3O60493 AC006504.3-201ENST00000586818 523 ntBASIC3.02□□□□□ -1.93
SNX3O60493 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX3O60493 AL162713.1-201ENST00000604480 262 ntBASIC3.02□□□□□ -1.93
SNX3O60493 AC008277.2-201ENST00000605196 797 ntBASIC3.02□□□□□ -1.93
SNX3O60493 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX3O60493 AC008250.2-201ENST00000615261 205 ntBASIC3.02□□□□□ -1.93
SNX3O60493 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SNX3O60493 AL136164.4-201ENST00000625013 2135 ntBASIC3.02□□□□□ -1.93
SNX3O60493 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
SNX3O60493 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX3O60493 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SNX3O60493 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SNX3O60493 RNU4-1-201ENST00000363925 141 ntBASIC3.01□□□□□ -1.93
SNX3O60493 RNU6-297P-201ENST00000384636 107 ntBASIC3.01□□□□□ -1.93
SNX3O60493 SNORA26.7-201ENST00000391288 122 ntBASIC3.01□□□□□ -1.93
SNX3O60493 RPS4XP3-201ENST00000398541 413 ntBASIC3.01□□□□□ -1.93
SNX3O60493 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNX3O60493 AL357075.1-201ENST00000404107 726 ntBASIC3.01□□□□□ -1.93
SNX3O60493 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX3O60493 RNU2-62P-201ENST00000410868 191 ntBASIC3.01□□□□□ -1.93
SNX3O60493 RPS3AP3-201ENST00000411933 242 ntBASIC3.01□□□□□ -1.93
SNX3O60493 SETP8-201ENST00000435341 628 ntBASIC3.01□□□□□ -1.93
SNX3O60493 SETP5-201ENST00000437270 562 ntBASIC3.01□□□□□ -1.93
SNX3O60493 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.01□□□□□ -1.93
SNX3O60493 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.01□□□□□ -1.93
SNX3O60493 AC016696.1-201ENST00000446949 318 ntBASIC3.01□□□□□ -1.93
SNX3O60493 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.01□□□□□ -1.93
SNX3O60493 AL033528.1-201ENST00000453780 140 ntBASIC3.01□□□□□ -1.93
SNX3O60493 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.01□□□□□ -1.93
SNX3O60493 RN7SL385P-201ENST00000468873 276 ntBASIC3.01□□□□□ -1.93
SNX3O60493 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.01□□□□□ -1.93
SNX3O60493 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms