Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC112200.1-201ENST00000625015 234 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.31□□□□□ -1.88
ZIC3O60481 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.31□□□□□ -1.88
ZIC3O60481 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.31□□□□□ -1.88
ZIC3O60481 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.31□□□□□ -1.88
ZIC3O60481 AL034408.1-202ENST00000636088 415 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 AC009093.8-201ENST00000641769 292 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 USP8P1-201ENST00000494673 3183 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZIC3O60481 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZIC3O60481 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.31□□□□□ -1.88
ZIC3O60481 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.31□□□□□ -1.88
ZIC3O60481 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZIC3O60481 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZIC3O60481 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZIC3O60481 AC092326.2-201ENST00000624772 1561 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZIC3O60481 SNORA31-201ENST00000362607 130 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 RNA5SP322-201ENST00000363617 119 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 AL359837.1-201ENST00000381357 287 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 RNU6-483P-201ENST00000384088 108 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 RNU1-89P-201ENST00000384592 164 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 MIR607-201ENST00000385241 96 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 HSPE1P8-201ENST00000406997 288 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 MIR1277-201ENST00000408536 78 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 RNU2-9P-201ENST00000410194 145 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 RNU2-39P-201ENST00000410604 198 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 ATP5A1P2-201ENST00000412323 255 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 SDCBPP3-201ENST00000419629 891 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.3□□□□□ -1.88
ZIC3O60481 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.3□□□□□ -1.88
ZIC3O60481 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.3□□□□□ -1.88
ZIC3O60481 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.3□□□□□ -1.88
ZIC3O60481 AC027673.1-201ENST00000456245 405 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 RNU6-420P-201ENST00000458780 107 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 AC126389.1-201ENST00000477436 290 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 AC106707.2-201ENST00000484182 374 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 AC108860.1-201ENST00000484521 383 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.3□□□□□ -1.88
ZIC3O60481 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
ZIC3O60481 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.3□□□□□ -1.88
ZIC3O60481 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.3□□□□□ -1.88
ZIC3O60481 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
ZIC3O60481 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.3□□□□□ -1.88
ZIC3O60481 AC023141.12-201ENST00000512399 199 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.3□□□□□ -1.88
ZIC3O60481 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.3□□□□□ -1.88
ZIC3O60481 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.3□□□□□ -1.88
ZIC3O60481 AC109635.3-201ENST00000529536 185 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 OR4R1P-201ENST00000529879 463 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 AC093012.1-202ENST00000549403 582 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.3□□□□□ -1.88
ZIC3O60481 MED28P6-201ENST00000558776 231 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.3□□□□□ -1.88
ZIC3O60481 MIR4429-201ENST00000580105 73 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 AC007621.1-201ENST00000604544 437 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 SNORA51-201ENST00000606420 132 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.3□□□□□ -1.88
ZIC3O60481 FRG1KP-201ENST00000623592 341 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.3□□□□□ -1.88
ZIC3O60481 EXOC5P1-201ENST00000510543 1969 ntBASIC3.3□□□□□ -1.88
ZIC3O60481 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ZIC3O60481 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
ZIC3O60481 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZIC3O60481 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
ZIC3O60481 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
ZIC3O60481 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.29□□□□□ -1.88
ZIC3O60481 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.29□□□□□ -1.88
ZIC3O60481 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZIC3O60481 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
ZIC3O60481 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ZIC3O60481 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.29□□□□□ -1.88
ZIC3O60481 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.29□□□□□ -1.88
ZIC3O60481 SNORD9-201ENST00000362566 104 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 RNU6-1322P-201ENST00000364309 107 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 RNA5SP189-201ENST00000364920 115 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 Y_RNA.381-201ENST00000365666 102 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 RNU6-1158P-201ENST00000391167 107 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZIC3O60481 MTHFD2P2-201ENST00000407725 247 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 MIR1183-201ENST00000408856 89 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.29□□□□□ -1.88
ZIC3O60481 RPL21P109-201ENST00000422213 475 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 MTCO1P20-201ENST00000425366 358 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 ELOCP14-201ENST00000428070 331 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.29□□□□□ -1.88
ZIC3O60481 MTND1P2-201ENST00000430604 821 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 AL606489.2-201ENST00000433886 234 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 RPL7P54-201ENST00000438336 674 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 HMGB3P12-201ENST00000438745 556 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 AF228730.2-201ENST00000438784 848 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 ELOCP7-201ENST00000439968 331 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.29□□□□□ -1.88
ZIC3O60481 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.29□□□□□ -1.88
ZIC3O60481 RPL23AP31-201ENST00000456160 467 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 AC083798.1-201ENST00000472671 131 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 HSPE1P6-201ENST00000479457 291 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 AC092989.1-201ENST00000481235 277 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 RPL36AP51-201ENST00000487216 318 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 RPL23AP55-201ENST00000498163 452 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms