Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LCMT2O60294 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.79□□□□□ -1.96
LCMT2O60294 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.79□□□□□ -1.96
LCMT2O60294 FAM35BP-202ENST00000497389 3337 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.79□□□□□ -1.96
LCMT2O60294 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
LCMT2O60294 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.79□□□□□ -1.96
LCMT2O60294 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LCMT2O60294 Y_RNA.18-201ENST00000362461 102 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 RNU6-198P-201ENST00000384258 104 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 RNU6-769P-201ENST00000384407 104 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 SNORA44-201ENST00000384584 132 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 SNORA26.7-201ENST00000391288 122 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.79□□□□□ -1.96
LCMT2O60294 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.79□□□□□ -1.96
LCMT2O60294 HMGN2P30-201ENST00000423237 256 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 AL390023.1-201ENST00000428836 262 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 AL356867.1-201ENST00000429623 299 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.79□□□□□ -1.96
LCMT2O60294 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.79□□□□□ -1.96
LCMT2O60294 UBE2FP3-201ENST00000436366 524 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.79□□□□□ -1.96
LCMT2O60294 AC112653.1-201ENST00000443851 386 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 RNU7-125P-201ENST00000458760 62 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LCMT2O60294 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.79□□□□□ -1.96
LCMT2O60294 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.79□□□□□ -1.96
LCMT2O60294 SCGB1D5P-201ENST00000515134 247 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 SNORA74D-201ENST00000516404 141 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 AC026407.1-201ENST00000518369 204 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.79□□□□□ -1.96
LCMT2O60294 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.79□□□□□ -1.96
LCMT2O60294 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LCMT2O60294 AC008015.1-201ENST00000555505 465 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.79□□□□□ -1.96
LCMT2O60294 AC002400.1-201ENST00000569310 726 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.79□□□□□ -1.96
LCMT2O60294 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.79□□□□□ -1.96
LCMT2O60294 AL627309.6-201ENST00000606857 840 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 AC107214.2-201ENST00000608204 634 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 AL360219.1-201ENST00000610230 366 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.79□□□□□ -1.96
LCMT2O60294 AC090132.2-201ENST00000615881 347 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 AC091304.6-201ENST00000619761 202 ntBASIC2.79□□□□□ -1.96
LCMT2O60294 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
LCMT2O60294 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LCMT2O60294 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LCMT2O60294 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.78□□□□□ -1.96
LCMT2O60294 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LCMT2O60294 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LCMT2O60294 MIR325-201ENST00000385260 98 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LCMT2O60294 HMGB1P11-201ENST00000413899 637 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 EEF1A1P41-201ENST00000414667 207 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.78□□□□□ -1.96
LCMT2O60294 VPS26BP1-201ENST00000417155 755 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 AL590383.1-201ENST00000428602 75 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 MTND5P25-201ENST00000430499 799 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.78□□□□□ -1.96
LCMT2O60294 RPL21P2-201ENST00000440049 481 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.78□□□□□ -1.96
LCMT2O60294 ART2BP-201ENST00000453501 499 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 OR6K1P-201ENST00000456766 971 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.78□□□□□ -1.96
LCMT2O60294 RN7SL499P-201ENST00000481141 276 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 RPS3AP22-201ENST00000488297 769 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.78□□□□□ -1.96
LCMT2O60294 AC098862.1-201ENST00000504991 413 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 AC022447.3-201ENST00000506865 495 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 MRPS33P3-201ENST00000513456 322 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.78□□□□□ -1.96
LCMT2O60294 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.78□□□□□ -1.96
LCMT2O60294 MTATP6P15-201ENST00000527233 835 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 AP004247.1-201ENST00000531556 1289 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LCMT2O60294 MTND3P12-201ENST00000559068 328 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 AC010653.1-201ENST00000571108 881 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.78□□□□□ -1.96
LCMT2O60294 AC068313.1-201ENST00000604028 1008 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LCMT2O60294 AC005000.2-201ENST00000605468 310 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.78□□□□□ -1.96
LCMT2O60294 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LCMT2O60294 AC079597.1-201ENST00000624306 508 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 PCMTD1P7-201ENST00000634506 357 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 AC110079.1-202ENST00000635213 138 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 AC099063.3-201ENST00000642066 185 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 OR5H6-203ENST00000642105 978 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LCMT2O60294 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.78□□□□□ -1.96
LCMT2O60294 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LCMT2O60294 AL355596.1-201ENST00000565399 3996 ntBASIC2.78□□□□□ -1.96
LCMT2O60294 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.78□□□□□ -1.96
LCMT2O60294 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.78□□□□□ -1.96
LCMT2O60294 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LCMT2O60294 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
LCMT2O60294 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LCMT2O60294 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.77□□□□□ -1.97
LCMT2O60294 RNU1-35P-201ENST00000362782 153 ntBASIC2.77□□□□□ -1.97
LCMT2O60294 RNU5E-8P-201ENST00000363502 116 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms