Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.24□□□□□ -2.21
URB1O60287 SNRPGP13-201ENST00000442212 177 ntBASIC1.24□□□□□ -2.21
URB1O60287 RPL30P14-201ENST00000482744 348 ntBASIC1.24□□□□□ -2.21
URB1O60287 MTND3P24-201ENST00000506306 329 ntBASIC1.24□□□□□ -2.21
URB1O60287 MTCO3P44-201ENST00000510977 541 ntBASIC1.24□□□□□ -2.21
URB1O60287 RN7SKP277-201ENST00000516895 283 ntBASIC1.24□□□□□ -2.21
URB1O60287 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
URB1O60287 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
URB1O60287 MIR758-201ENST00000390227 88 ntBASIC1.23□□□□□ -2.21
URB1O60287 AL138880.1-201ENST00000405824 642 ntBASIC1.23□□□□□ -2.21
URB1O60287 SNORD23.1-201ENST00000408212 104 ntBASIC1.23□□□□□ -2.21
URB1O60287 AL035407.2-201ENST00000454090 378 ntBASIC1.23□□□□□ -2.21
URB1O60287 AC010285.1-201ENST00000470580 392 ntBASIC1.23□□□□□ -2.21
URB1O60287 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.23□□□□□ -2.21
URB1O60287 AC090821.2-201ENST00000523552 176 ntBASIC1.23□□□□□ -2.21
URB1O60287 AP005435.4-201ENST00000529514 284 ntBASIC1.23□□□□□ -2.21
URB1O60287 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.23□□□□□ -2.21
URB1O60287 MTND4LP24-201ENST00000572277 291 ntBASIC1.23□□□□□ -2.21
URB1O60287 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.23□□□□□ -2.21
URB1O60287 AC068831.7-201ENST00000616954 363 ntBASIC1.23□□□□□ -2.21
URB1O60287 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.23□□□□□ -2.21
URB1O60287 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.23□□□□□ -2.21
URB1O60287 AC007342.9-201ENST00000623877 1385 ntBASIC1.23□□□□□ -2.21
URB1O60287 AC090740.1-201ENST00000623193 2262 ntBASIC1.23□□□□□ -2.21
URB1O60287 SNORA6-201ENST00000384033 151 ntBASIC1.23□□□□□ -2.21
URB1O60287 SNORA51.12-201ENST00000384448 134 ntBASIC1.23□□□□□ -2.21
URB1O60287 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.23□□□□□ -2.21
URB1O60287 RPL21P32-201ENST00000419877 477 ntBASIC1.23□□□□□ -2.21
URB1O60287 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.23□□□□□ -2.21
URB1O60287 AL445305.1-201ENST00000432577 575 ntBASIC1.23□□□□□ -2.21
URB1O60287 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC1.23□□□□□ -2.21
URB1O60287 FABP5P3-201ENST00000437960 408 ntBASIC1.23□□□□□ -2.21
URB1O60287 snoU13.3-201ENST00000459441 104 ntBASIC1.23□□□□□ -2.21
URB1O60287 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.23□□□□□ -2.21
URB1O60287 AC105914.1-201ENST00000511798 226 ntBASIC1.23□□□□□ -2.21
URB1O60287 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.23□□□□□ -2.21
URB1O60287 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.23□□□□□ -2.21
URB1O60287 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.23□□□□□ -2.21
URB1O60287 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.23□□□□□ -2.21
URB1O60287 AC140725.3-201ENST00000616193 880 ntBASIC1.23□□□□□ -2.21
URB1O60287 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.23□□□□□ -2.21
URB1O60287 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.23□□□□□ -2.21
URB1O60287 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
URB1O60287 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
URB1O60287 RNU6-1331P-201ENST00000363658 106 ntBASIC1.22□□□□□ -2.21
URB1O60287 RNU6-335P-201ENST00000364563 113 ntBASIC1.22□□□□□ -2.21
URB1O60287 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.22□□□□□ -2.21
URB1O60287 RPS3AP44-201ENST00000425466 790 ntBASIC1.22□□□□□ -2.21
URB1O60287 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
URB1O60287 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.22□□□□□ -2.21
URB1O60287 AC024619.4-201ENST00000580924 316 ntBASIC1.22□□□□□ -2.21
URB1O60287 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.22□□□□□ -2.21
URB1O60287 AC010928.2-201ENST00000588017 287 ntBASIC1.22□□□□□ -2.21
URB1O60287 AP005137.2-201ENST00000609238 400 ntBASIC1.22□□□□□ -2.21
URB1O60287 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.22□□□□□ -2.21
URB1O60287 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
URB1O60287 SNORA18.2-201ENST00000383865 132 ntBASIC1.22□□□□□ -2.21
URB1O60287 RNU7-26P-201ENST00000458980 63 ntBASIC1.22□□□□□ -2.21
URB1O60287 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
URB1O60287 DUXAP5-201ENST00000529668 529 ntBASIC1.22□□□□□ -2.21
URB1O60287 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.22□□□□□ -2.21
URB1O60287 NBEAP1-201ENST00000554452 979 ntBASIC1.22□□□□□ -2.21
URB1O60287 HSPE1P3-201ENST00000559254 309 ntBASIC1.22□□□□□ -2.21
URB1O60287 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.22□□□□□ -2.21
URB1O60287 CBX3P2-202ENST00000583365 535 ntBASIC1.22□□□□□ -2.21
URB1O60287 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
URB1O60287 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
URB1O60287 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
URB1O60287 AC096656.1-201ENST00000623826 1364 ntBASIC1.21□□□□□ -2.22
URB1O60287 Y_RNA.251-201ENST00000364551 99 ntBASIC1.21□□□□□ -2.22
URB1O60287 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.21□□□□□ -2.22
URB1O60287 BMI1P1-201ENST00000445879 941 ntBASIC1.21□□□□□ -2.22
URB1O60287 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.21□□□□□ -2.22
URB1O60287 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.21□□□□□ -2.22
URB1O60287 RNU6-113P-201ENST00000516653 101 ntBASIC1.21□□□□□ -2.22
URB1O60287 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.21□□□□□ -2.22
URB1O60287 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.21□□□□□ -2.22
URB1O60287 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.21□□□□□ -2.22
URB1O60287 AL359851.1-201ENST00000569460 4997 ntBASIC1.21□□□□□ -2.22
URB1O60287 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
URB1O60287 SNORD48-201ENST00000364953 64 ntBASIC1.2□□□□□ -2.22
URB1O60287 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.2□□□□□ -2.22
URB1O60287 PSMA2P3-201ENST00000429685 675 ntBASIC1.2□□□□□ -2.22
URB1O60287 AC093716.1-201ENST00000435923 377 ntBASIC1.2□□□□□ -2.22
URB1O60287 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.2□□□□□ -2.22
URB1O60287 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.2□□□□□ -2.22
URB1O60287 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
URB1O60287 AC087343.1-201ENST00000477341 475 ntBASIC1.2□□□□□ -2.22
URB1O60287 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.2□□□□□ -2.22
URB1O60287 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.2□□□□□ -2.22
URB1O60287 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.2□□□□□ -2.22
URB1O60287 PCNAP1-202ENST00000595299 752 ntBASIC1.2□□□□□ -2.22
URB1O60287 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.2□□□□□ -2.22
URB1O60287 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.2□□□□□ -2.22
URB1O60287 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
URB1O60287 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
URB1O60287 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
URB1O60287 RNU1-133P-201ENST00000364867 167 ntBASIC1.2□□□□□ -2.22
URB1O60287 UBE2V1P13-201ENST00000436983 439 ntBASIC1.2□□□□□ -2.22
URB1O60287 AL136380.1-201ENST00000447970 162 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms