Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LDB2O43679 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LDB2O43679 FRG1CP-201ENST00000358464 769 ntBASIC3.52□□□□□ -1.85
LDB2O43679 Y_RNA.88-201ENST00000363029 99 ntBASIC3.52□□□□□ -1.85
LDB2O43679 RNU6-1090P-201ENST00000364065 94 ntBASIC3.52□□□□□ -1.85
LDB2O43679 Y_RNA.333-201ENST00000365274 102 ntBASIC3.52□□□□□ -1.85
LDB2O43679 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
LDB2O43679 RNU6-278P-201ENST00000390945 109 ntBASIC3.52□□□□□ -1.85
LDB2O43679 RN7SKP285-201ENST00000410137 318 ntBASIC3.52□□□□□ -1.85
LDB2O43679 RNU6-712P-201ENST00000410558 100 ntBASIC3.52□□□□□ -1.85
LDB2O43679 RNU6-516P-201ENST00000411381 104 ntBASIC3.52□□□□□ -1.85
LDB2O43679 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB2O43679 USP9YP6-201ENST00000413550 854 ntBASIC3.52□□□□□ -1.85
LDB2O43679 RPL30P2-201ENST00000414021 291 ntBASIC3.52□□□□□ -1.85
LDB2O43679 AL353193.1-201ENST00000421444 268 ntBASIC3.52□□□□□ -1.85
LDB2O43679 BEND7P1-201ENST00000422058 457 ntBASIC3.52□□□□□ -1.85
LDB2O43679 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB2O43679 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB2O43679 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB2O43679 AC079781.2-201ENST00000446424 169 ntBASIC3.52□□□□□ -1.85
LDB2O43679 HMGN2P21-201ENST00000447764 270 ntBASIC3.52□□□□□ -1.85
LDB2O43679 U3.44-201ENST00000458938 192 ntBASIC3.52□□□□□ -1.85
LDB2O43679 RPL7P23-201ENST00000493874 747 ntBASIC3.52□□□□□ -1.85
LDB2O43679 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB2O43679 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.52□□□□□ -1.85
LDB2O43679 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB2O43679 RNU6-1095P-201ENST00000516148 108 ntBASIC3.52□□□□□ -1.85
LDB2O43679 Y_RNA.704-201ENST00000516851 102 ntBASIC3.52□□□□□ -1.85
LDB2O43679 RNU6-1220P-201ENST00000517126 108 ntBASIC3.52□□□□□ -1.85
LDB2O43679 AC103783.1-201ENST00000520506 373 ntBASIC3.52□□□□□ -1.85
LDB2O43679 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB2O43679 AC118273.2-201ENST00000532092 465 ntBASIC3.52□□□□□ -1.85
LDB2O43679 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.52□□□□□ -1.85
LDB2O43679 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB2O43679 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.52□□□□□ -1.85
LDB2O43679 AL359212.1-201ENST00000556608 614 ntBASIC3.52□□□□□ -1.85
LDB2O43679 MIR548S-201ENST00000581352 82 ntBASIC3.52□□□□□ -1.85
LDB2O43679 AC006116.10-201ENST00000591836 581 ntBASIC3.52□□□□□ -1.85
LDB2O43679 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB2O43679 AC012669.1-201ENST00000603209 283 ntBASIC3.52□□□□□ -1.85
LDB2O43679 AP000907.4-201ENST00000604143 237 ntBASIC3.52□□□□□ -1.85
LDB2O43679 U3.45-201ENST00000607547 219 ntBASIC3.52□□□□□ -1.85
LDB2O43679 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.52□□□□□ -1.85
LDB2O43679 AL357559.1-201ENST00000622228 274 ntBASIC3.52□□□□□ -1.85
LDB2O43679 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.52□□□□□ -1.85
LDB2O43679 MIR1321-201ENST00000637766 79 ntBASIC3.52□□□□□ -1.85
LDB2O43679 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.52□□□□□ -1.85
LDB2O43679 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LDB2O43679 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
LDB2O43679 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
LDB2O43679 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
LDB2O43679 OTUD4P1-201ENST00000237841 3067 ntBASIC3.52□□□□□ -1.85
LDB2O43679 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
LDB2O43679 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LDB2O43679 AL161912.2-201ENST00000565707 3007 ntBASIC3.51□□□□□ -1.85
LDB2O43679 RNU6-1322P-201ENST00000364309 107 ntBASIC3.51□□□□□ -1.85
LDB2O43679 U3.11-201ENST00000364476 212 ntBASIC3.51□□□□□ -1.85
LDB2O43679 RNU6-637P-201ENST00000384050 107 ntBASIC3.51□□□□□ -1.85
LDB2O43679 RNU6-432P-201ENST00000384196 109 ntBASIC3.51□□□□□ -1.85
LDB2O43679 SNORA11.1-201ENST00000408133 129 ntBASIC3.51□□□□□ -1.85
LDB2O43679 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.51□□□□□ -1.85
LDB2O43679 RPS7P15-201ENST00000415804 584 ntBASIC3.51□□□□□ -1.85
LDB2O43679 USP9YP27-201ENST00000418455 438 ntBASIC3.51□□□□□ -1.85
LDB2O43679 MTCO1P20-201ENST00000425366 358 ntBASIC3.51□□□□□ -1.85
LDB2O43679 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.51□□□□□ -1.85
LDB2O43679 AL138799.3-201ENST00000438968 350 ntBASIC3.51□□□□□ -1.85
LDB2O43679 MTCO3P18-201ENST00000440206 761 ntBASIC3.51□□□□□ -1.85
LDB2O43679 NFU1P2-201ENST00000448700 469 ntBASIC3.51□□□□□ -1.85
LDB2O43679 AC140076.1-201ENST00000449897 361 ntBASIC3.51□□□□□ -1.85
LDB2O43679 AC234775.1-201ENST00000454247 670 ntBASIC3.51□□□□□ -1.85
LDB2O43679 AC022364.2-201ENST00000457963 554 ntBASIC3.51□□□□□ -1.85
LDB2O43679 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.51□□□□□ -1.85
LDB2O43679 AC106707.2-201ENST00000484182 374 ntBASIC3.51□□□□□ -1.85
LDB2O43679 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LDB2O43679 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.51□□□□□ -1.85
LDB2O43679 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.51□□□□□ -1.85
LDB2O43679 AC026784.1-201ENST00000507986 352 ntBASIC3.51□□□□□ -1.85
LDB2O43679 PCBP2P3-201ENST00000509726 843 ntBASIC3.51□□□□□ -1.85
LDB2O43679 AC023141.12-201ENST00000512399 199 ntBASIC3.51□□□□□ -1.85
LDB2O43679 RN7SKP13-201ENST00000515933 244 ntBASIC3.51□□□□□ -1.85
LDB2O43679 SCARNA24.1-201ENST00000516465 137 ntBASIC3.51□□□□□ -1.85
LDB2O43679 RNU6-410P-201ENST00000517006 107 ntBASIC3.51□□□□□ -1.85
LDB2O43679 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.51□□□□□ -1.85
LDB2O43679 HMGN1P28-201ENST00000521340 364 ntBASIC3.51□□□□□ -1.85
LDB2O43679 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.51□□□□□ -1.85
LDB2O43679 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.51□□□□□ -1.85
LDB2O43679 AC105224.1-201ENST00000587055 421 ntBASIC3.51□□□□□ -1.85
LDB2O43679 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.51□□□□□ -1.85
LDB2O43679 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.51□□□□□ -1.85
LDB2O43679 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.51□□□□□ -1.85
LDB2O43679 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.51□□□□□ -1.85
LDB2O43679 AC002553.4-201ENST00000616896 331 ntBASIC3.51□□□□□ -1.85
LDB2O43679 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LDB2O43679 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.51□□□□□ -1.85
LDB2O43679 AL008636.1-201ENST00000625038 1018 ntBASIC3.51□□□□□ -1.85
LDB2O43679 AC005609.4-201ENST00000625071 447 ntBASIC3.51□□□□□ -1.85
LDB2O43679 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.51□□□□□ -1.85
LDB2O43679 MFSD8-233ENST00000641482 4860 ntBASIC3.51□□□□□ -1.85
LDB2O43679 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
LDB2O43679 CR848007.1-201ENST00000442354 1699 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms