Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AP001804.3-201ENST00000525146 880 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 AP005435.4-201ENST00000529514 284 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.83□□□□□ -1.64
SRGAP3O43295 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.83□□□□□ -1.64
SRGAP3O43295 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.83□□□□□ -1.64
SRGAP3O43295 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.83□□□□□ -1.64
SRGAP3O43295 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRGAP3O43295 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.83□□□□□ -1.64
SRGAP3O43295 AC113194.1-201ENST00000606037 500 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.83□□□□□ -1.64
SRGAP3O43295 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRGAP3O43295 AL132822.1-201ENST00000617063 513 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 AC015908.5-201ENST00000623289 343 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 AC244517.1-201ENST00000606030 2086 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.83□□□□□ -1.64
SRGAP3O43295 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRGAP3O43295 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRGAP3O43295 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.83□□□□□ -1.64
SRGAP3O43295 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRGAP3O43295 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRGAP3O43295 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SRGAP3O43295 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRGAP3O43295 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.82□□□□□ -1.64
SRGAP3O43295 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRGAP3O43295 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.82□□□□□ -1.64
SRGAP3O43295 HSPE1P11-201ENST00000339579 310 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 U3.11-201ENST00000364476 212 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRGAP3O43295 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRGAP3O43295 RNU6-1029P-201ENST00000384109 107 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 MIR19A-201ENST00000384878 82 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 MIR199A2-201ENST00000385289 110 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SRGAP3O43295 RNU6-370P-201ENST00000411008 104 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 MED13P1-201ENST00000428342 171 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 RPS3AP52-201ENST00000435639 297 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.82□□□□□ -1.64
SRGAP3O43295 IPO7P1-201ENST00000442031 636 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 AC126389.1-201ENST00000477436 290 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.82□□□□□ -1.64
SRGAP3O43295 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.82□□□□□ -1.64
SRGAP3O43295 AC116562.3-201ENST00000506136 177 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.82□□□□□ -1.64
SRGAP3O43295 AC026726.1-201ENST00000512859 601 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 RNU6-864P-201ENST00000516256 108 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 HMGB1P41-201ENST00000520234 440 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 AC068587.5-201ENST00000528506 175 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRGAP3O43295 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRGAP3O43295 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.82□□□□□ -1.64
SRGAP3O43295 AL163153.1-201ENST00000554223 283 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 AL358913.1-201ENST00000554342 121 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 HSPE1P5-201ENST00000561489 272 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.82□□□□□ -1.64
SRGAP3O43295 COX6CP3-201ENST00000580869 223 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.82□□□□□ -1.64
SRGAP3O43295 MIR3942-201ENST00000585264 109 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 XIAPP1-201ENST00000603162 600 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 AC124312.5-201ENST00000604451 268 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 AC103710.2-201ENST00000609912 942 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.82□□□□□ -1.64
SRGAP3O43295 AC244517.12-201ENST00000623581 663 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.82□□□□□ -1.64
SRGAP3O43295 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.82□□□□□ -1.64
SRGAP3O43295 MTND5P28-201ENST00000438005 1594 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 AC007823.1-201ENST00000569932 1566 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 MAPK10-253ENST00000641010 4072 ntBASIC4.82□□□□□ -1.64
SRGAP3O43295 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.82□□□□□ -1.64
SRGAP3O43295 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.81□□□□□ -1.64
SRGAP3O43295 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SRGAP3O43295 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SRGAP3O43295 U1.1-201ENST00000384101 164 ntBASIC4.81□□□□□ -1.64
SRGAP3O43295 MIR30B-201ENST00000384850 88 ntBASIC4.81□□□□□ -1.64
SRGAP3O43295 BX323014.1-201ENST00000412876 237 ntBASIC4.81□□□□□ -1.64
SRGAP3O43295 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.81□□□□□ -1.64
SRGAP3O43295 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.81□□□□□ -1.64
SRGAP3O43295 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.81□□□□□ -1.64
SRGAP3O43295 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.81□□□□□ -1.64
SRGAP3O43295 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.81□□□□□ -1.64
SRGAP3O43295 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SRGAP3O43295 AL139099.1-201ENST00000497398 403 ntBASIC4.81□□□□□ -1.64
SRGAP3O43295 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.81□□□□□ -1.64
SRGAP3O43295 AC093303.1-201ENST00000514549 295 ntBASIC4.81□□□□□ -1.64
SRGAP3O43295 RNU7-51P-201ENST00000516560 62 ntBASIC4.81□□□□□ -1.64
SRGAP3O43295 SCARNA14-201ENST00000516903 136 ntBASIC4.81□□□□□ -1.64
SRGAP3O43295 AP000763.2-201ENST00000540641 163 ntBASIC4.81□□□□□ -1.64
SRGAP3O43295 MIR5685-201ENST00000579080 79 ntBASIC4.81□□□□□ -1.64
SRGAP3O43295 AL020997.2-201ENST00000602607 184 ntBASIC4.81□□□□□ -1.64
SRGAP3O43295 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.81□□□□□ -1.64
SRGAP3O43295 AC099669.2-201ENST00000616549 437 ntBASIC4.81□□□□□ -1.64
SRGAP3O43295 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
SRGAP3O43295 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SRGAP3O43295 TAB3P1-202ENST00000452645 1634 ntBASIC4.81□□□□□ -1.64
SRGAP3O43295 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SRGAP3O43295 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SRGAP3O43295 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.81□□□□□ -1.64
SRGAP3O43295 UBE3AP2-201ENST00000429033 2259 ntBASIC4.81□□□□□ -1.64
SRGAP3O43295 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SRGAP3O43295 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRGAP3O43295 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms