Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 MIR6852-201ENST00000621699 66 ntBASIC2.86□□□□□ -1.95
CLDN3O15551 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.86□□□□□ -1.95
CLDN3O15551 AC099063.3-201ENST00000642066 185 ntBASIC2.86□□□□□ -1.95
CLDN3O15551 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.86□□□□□ -1.95
CLDN3O15551 DDX43P2-201ENST00000604753 1354 ntBASIC2.86□□□□□ -1.95
CLDN3O15551 AL138713.1-201ENST00000624026 2130 ntBASIC2.86□□□□□ -1.95
CLDN3O15551 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
CLDN3O15551 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLDN3O15551 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CLDN3O15551 RNU6-432P-201ENST00000384196 109 ntBASIC2.85□□□□□ -1.95
CLDN3O15551 RNU6-193P-201ENST00000410977 107 ntBASIC2.85□□□□□ -1.95
CLDN3O15551 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.85□□□□□ -1.95
CLDN3O15551 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.85□□□□□ -1.95
CLDN3O15551 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLDN3O15551 AL714022.1-201ENST00000439897 151 ntBASIC2.85□□□□□ -1.95
CLDN3O15551 Z82210.1-201ENST00000440037 231 ntBASIC2.85□□□□□ -1.95
CLDN3O15551 AL049734.2-201ENST00000441066 616 ntBASIC2.85□□□□□ -1.95
CLDN3O15551 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.85□□□□□ -1.95
CLDN3O15551 ATG12P2-201ENST00000456830 416 ntBASIC2.85□□□□□ -1.95
CLDN3O15551 AC116337.2-201ENST00000477662 156 ntBASIC2.85□□□□□ -1.95
CLDN3O15551 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.85□□□□□ -1.95
CLDN3O15551 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.85□□□□□ -1.95
CLDN3O15551 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.85□□□□□ -1.95
CLDN3O15551 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.85□□□□□ -1.95
CLDN3O15551 TRAV28-201ENST00000557548 323 ntBASIC2.85□□□□□ -1.95
CLDN3O15551 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.85□□□□□ -1.95
CLDN3O15551 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.85□□□□□ -1.95
CLDN3O15551 TPMTP1-201ENST00000592307 737 ntBASIC2.85□□□□□ -1.95
CLDN3O15551 AL160237.3-201ENST00000604114 1013 ntBASIC2.85□□□□□ -1.95
CLDN3O15551 AC103710.4-201ENST00000609301 899 ntBASIC2.85□□□□□ -1.95
CLDN3O15551 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CLDN3O15551 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.85□□□□□ -1.95
CLDN3O15551 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLDN3O15551 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 SNORD62.1-201ENST00000362541 86 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN3O15551 AL139039.1-201ENST00000401900 692 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 RPS4XP8-201ENST00000402039 771 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 FO393413.1-201ENST00000402892 195 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 RPL19P1-201ENST00000411635 428 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 AL365496.1-201ENST00000426885 215 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 AC011816.1-201ENST00000441346 546 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN3O15551 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN3O15551 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.84□□□□□ -1.95
CLDN3O15551 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN3O15551 OR6K1P-201ENST00000456766 971 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 RNU7-23P-201ENST00000459465 62 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 KC877373.1-201ENST00000479066 408 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.84□□□□□ -1.95
CLDN3O15551 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.84□□□□□ -1.95
CLDN3O15551 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN3O15551 AC021146.8-201ENST00000507455 733 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.84□□□□□ -1.95
CLDN3O15551 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN3O15551 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.84□□□□□ -1.95
CLDN3O15551 AC100870.1-201ENST00000522035 505 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN3O15551 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.84□□□□□ -1.95
CLDN3O15551 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN3O15551 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN3O15551 AC002545.1-201ENST00000592511 181 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN3O15551 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.84□□□□□ -1.95
CLDN3O15551 AC005014.3-201ENST00000605985 190 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 AC010133.1-201ENST00000615809 842 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 AC079228.1-201ENST00000624774 1049 ntBASIC2.84□□□□□ -1.95
CLDN3O15551 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CLDN3O15551 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.84□□□□□ -1.96
CLDN3O15551 AL136360.1-201ENST00000503377 1900 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CLDN3O15551 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CLDN3O15551 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CLDN3O15551 AL672167.1-206ENST00000356293 943 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 RNU6-777P-201ENST00000364265 104 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 TXNP7-201ENST00000406296 293 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.83□□□□□ -1.96
CLDN3O15551 RN7SKP140-201ENST00000411196 284 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 RAP1BP1-201ENST00000412709 553 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 USP9YP20-201ENST00000419224 558 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 AL513175.2-201ENST00000422071 443 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 BNIP3P2-201ENST00000441221 577 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 COX6CP2-201ENST00000444980 225 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 MTCYBP3-201ENST00000445588 1137 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.83□□□□□ -1.96
CLDN3O15551 MTND2P39-201ENST00000457230 764 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 AP1S2P1-201ENST00000457344 379 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 AC087588.1-201ENST00000462203 316 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 RPS27AP9-201ENST00000477681 438 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 AC138853.1-201ENST00000503549 823 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.83□□□□□ -1.96
CLDN3O15551 AC010587.2-201ENST00000511727 448 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 OR5BM1P-201ENST00000512021 366 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 AC128657.1-201ENST00000549459 145 ntBASIC2.83□□□□□ -1.96
CLDN3O15551 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.83□□□□□ -1.96
CLDN3O15551 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.83□□□□□ -1.96
CLDN3O15551 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.83□□□□□ -1.96
CLDN3O15551 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms