Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 RNU2-49P-201ENST00000410666 184 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 AL357078.2-201ENST00000416486 427 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 AC009963.1-201ENST00000417265 157 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.61□□□□□ -2.15
HMGB3O15347 AIMP1P2-201ENST00000425294 312 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 AC027124.2-201ENST00000428249 105 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.61□□□□□ -2.15
HMGB3O15347 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.61□□□□□ -2.15
HMGB3O15347 AC108938.1-201ENST00000451204 136 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 RPS3P1-201ENST00000456781 192 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 MTCO1P42-201ENST00000457379 726 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.61□□□□□ -2.15
HMGB3O15347 AL121769.1-201ENST00000469473 401 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.61□□□□□ -2.15
HMGB3O15347 RN7SL432P-201ENST00000484057 298 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 AL049874.1-201ENST00000489560 388 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMGB3O15347 AC105252.1-201ENST00000503089 286 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMGB3O15347 HMGB3P17-201ENST00000504195 649 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMGB3O15347 AC048346.1-201ENST00000510247 144 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMGB3O15347 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.61□□□□□ -2.15
HMGB3O15347 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.61□□□□□ -2.15
HMGB3O15347 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
HMGB3O15347 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.61□□□□□ -2.15
HMGB3O15347 AC008127.2-201ENST00000549925 1075 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 AC234778.2-201ENST00000566241 354 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.61□□□□□ -2.15
HMGB3O15347 MIR1254-2-201ENST00000579553 63 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.61□□□□□ -2.15
HMGB3O15347 AC007179.3-201ENST00000604976 235 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 MIR1264-201ENST00000616374 69 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 AC109809.1-201ENST00000619665 545 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.61□□□□□ -2.15
HMGB3O15347 AC025048.6-202ENST00000627667 438 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 CTSLP2-204ENST00000629029 392 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.61□□□□□ -2.15
HMGB3O15347 OR4G2P-202ENST00000641004 1759 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 MFSD8-213ENST00000641134 1327 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMGB3O15347 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMGB3O15347 FTLP6-201ENST00000355274 422 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 AC062016.1-201ENST00000355719 319 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 AL512604.1-201ENST00000404812 257 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 ATF1P1-201ENST00000406040 927 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 AC096664.2-201ENST00000411843 406 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 AC096649.2-201ENST00000416186 393 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.6□□□□□ -2.15
HMGB3O15347 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.6□□□□□ -2.15
HMGB3O15347 RPL21P133-201ENST00000443666 476 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 MTCO1P48-201ENST00000448024 1096 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMGB3O15347 AC107393.1-201ENST00000512403 346 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMGB3O15347 AC118273.2-201ENST00000532092 465 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMGB3O15347 AL133241.1-201ENST00000556832 487 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 MIR4287-201ENST00000579398 78 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.6□□□□□ -2.15
HMGB3O15347 AP000403.1-201ENST00000603349 851 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 AC004908.2-201ENST00000609090 574 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 BX323046.1-201ENST00000610145 535 ntBASIC1.6□□□□□ -2.15
HMGB3O15347 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HMGB3O15347 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
HMGB3O15347 AC005832.2-201ENST00000538921 1430 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
HMGB3O15347 RNU6-582P-201ENST00000362989 107 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.59□□□□□ -2.15
HMGB3O15347 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.59□□□□□ -2.15
HMGB3O15347 XKRYP1-201ENST00000423438 492 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 XKRYP2-201ENST00000432915 492 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 AL500527.1-201ENST00000448532 255 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 AL353691.1-201ENST00000451332 387 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 AL109933.2-201ENST00000452651 260 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 USP9YP34-201ENST00000453983 808 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 RPL23AP42-201ENST00000471152 471 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.59□□□□□ -2.15
HMGB3O15347 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.59□□□□□ -2.15
HMGB3O15347 SNORA31.6-201ENST00000516241 130 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 MIR892C-201ENST00000516410 77 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 SCARNA16.3-201ENST00000516595 184 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 RNA5SP135-201ENST00000517019 125 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 AP003066.2-201ENST00000529375 555 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.59□□□□□ -2.15
HMGB3O15347 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.59□□□□□ -2.15
HMGB3O15347 AL132857.1-201ENST00000555180 708 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 AL049838.1-201ENST00000563647 981 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 AC093519.1-201ENST00000566109 298 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 AC106734.1-201ENST00000568646 663 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.59□□□□□ -2.15
HMGB3O15347 AC133794.1-201ENST00000602731 914 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 SNRPGP19-201ENST00000603826 189 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 AC012493.3-201ENST00000604494 112 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 MTND4LP5-201ENST00000605152 292 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 AC007349.4-201ENST00000608114 532 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 AL590099.1-201ENST00000615276 138 ntBASIC1.59□□□□□ -2.15
HMGB3O15347 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms