Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.46□□□□□ -2.02
LSM1O15116 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LSM1O15116 AF274854.1-201ENST00000413236 615 ntBASIC2.46□□□□□ -2.02
LSM1O15116 MTND1P23-201ENST00000416931 372 ntBASIC2.46□□□□□ -2.02
LSM1O15116 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.46□□□□□ -2.02
LSM1O15116 AC104389.3-201ENST00000445629 235 ntBASIC2.46□□□□□ -2.02
LSM1O15116 AC002381.1-201ENST00000447049 280 ntBASIC2.46□□□□□ -2.02
LSM1O15116 MTND1P9-201ENST00000453775 944 ntBASIC2.46□□□□□ -2.02
LSM1O15116 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.46□□□□□ -2.02
LSM1O15116 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.46□□□□□ -2.02
LSM1O15116 RNY4P37-201ENST00000516225 96 ntBASIC2.46□□□□□ -2.02
LSM1O15116 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.46□□□□□ -2.02
LSM1O15116 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.46□□□□□ -2.02
LSM1O15116 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.46□□□□□ -2.02
LSM1O15116 AL132657.2-201ENST00000564417 358 ntBASIC2.46□□□□□ -2.02
LSM1O15116 AC005498.1-201ENST00000592125 465 ntBASIC2.46□□□□□ -2.02
LSM1O15116 VN1R83P-201ENST00000595685 445 ntBASIC2.46□□□□□ -2.02
LSM1O15116 BNIP3P19-201ENST00000605397 577 ntBASIC2.46□□□□□ -2.02
LSM1O15116 FTX_3.1-201ENST00000610451 147 ntBASIC2.46□□□□□ -2.02
LSM1O15116 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.46□□□□□ -2.02
LSM1O15116 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
LSM1O15116 CCT4P2-201ENST00000233836 1548 ntBASIC2.46□□□□□ -2.02
LSM1O15116 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.46□□□□□ -2.02
LSM1O15116 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
LSM1O15116 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LSM1O15116 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
LSM1O15116 AC011477.1-204ENST00000623416 1325 ntBASIC2.45□□□□□ -2.02
LSM1O15116 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
LSM1O15116 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
LSM1O15116 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LSM1O15116 FTLP6-201ENST00000355274 422 ntBASIC2.45□□□□□ -2.02
LSM1O15116 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LSM1O15116 RNU6-1078P-201ENST00000364522 103 ntBASIC2.45□□□□□ -2.02
LSM1O15116 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.45□□□□□ -2.02
LSM1O15116 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
LSM1O15116 RNU6-637P-201ENST00000384050 107 ntBASIC2.45□□□□□ -2.02
LSM1O15116 MIR491-201ENST00000384877 84 ntBASIC2.45□□□□□ -2.02
LSM1O15116 RNU6-754P-201ENST00000391166 107 ntBASIC2.45□□□□□ -2.02
LSM1O15116 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.45□□□□□ -2.02
LSM1O15116 RNA5SP80-201ENST00000410475 111 ntBASIC2.45□□□□□ -2.02
LSM1O15116 AC023141.4-201ENST00000412031 328 ntBASIC2.45□□□□□ -2.02
LSM1O15116 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.45□□□□□ -2.02
LSM1O15116 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.45□□□□□ -2.02
LSM1O15116 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.45□□□□□ -2.02
LSM1O15116 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.45□□□□□ -2.02
LSM1O15116 GTF2IP3-201ENST00000433887 494 ntBASIC2.45□□□□□ -2.02
LSM1O15116 AC105272.1-201ENST00000438604 198 ntBASIC2.45□□□□□ -2.02
LSM1O15116 RPS12P2-201ENST00000439728 269 ntBASIC2.45□□□□□ -2.02
LSM1O15116 MTND5P14-201ENST00000441481 1267 ntBASIC2.45□□□□□ -2.02
LSM1O15116 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.45□□□□□ -2.02
LSM1O15116 MTND2P24-201ENST00000453434 806 ntBASIC2.45□□□□□ -2.02
LSM1O15116 MRPS17P3-201ENST00000465453 385 ntBASIC2.45□□□□□ -2.02
LSM1O15116 FAM172BP-201ENST00000487497 1089 ntBASIC2.45□□□□□ -2.02
LSM1O15116 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.45□□□□□ -2.02
LSM1O15116 AC034159.1-201ENST00000513885 583 ntBASIC2.45□□□□□ -2.02
LSM1O15116 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.45□□□□□ -2.02
LSM1O15116 ATP5F1P5-201ENST00000526403 760 ntBASIC2.45□□□□□ -2.02
LSM1O15116 DEFB131D-201ENST00000526803 184 ntBASIC2.45□□□□□ -2.02
LSM1O15116 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.45□□□□□ -2.02
LSM1O15116 OR6C7P-201ENST00000547875 934 ntBASIC2.45□□□□□ -2.02
LSM1O15116 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LSM1O15116 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.45□□□□□ -2.02
LSM1O15116 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.45□□□□□ -2.02
LSM1O15116 AC025281.1-201ENST00000567026 265 ntBASIC2.45□□□□□ -2.02
LSM1O15116 RPL23AP84-201ENST00000571193 464 ntBASIC2.45□□□□□ -2.02
LSM1O15116 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.45□□□□□ -2.02
LSM1O15116 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.45□□□□□ -2.02
LSM1O15116 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LSM1O15116 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.45□□□□□ -2.02
LSM1O15116 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.45□□□□□ -2.02
LSM1O15116 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
LSM1O15116 AL138713.1-201ENST00000624026 2130 ntBASIC2.45□□□□□ -2.02
LSM1O15116 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LSM1O15116 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
LSM1O15116 DDX10P1-201ENST00000448545 1933 ntBASIC2.44□□□□□ -2.02
LSM1O15116 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LSM1O15116 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
LSM1O15116 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LSM1O15116 SNORA23-201ENST00000365128 182 ntBASIC2.44□□□□□ -2.02
LSM1O15116 RNU1-39P-201ENST00000383897 165 ntBASIC2.44□□□□□ -2.02
LSM1O15116 AL590084.1-201ENST00000407885 387 ntBASIC2.44□□□□□ -2.02
LSM1O15116 AL513331.1-201ENST00000411908 397 ntBASIC2.44□□□□□ -2.02
LSM1O15116 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.44□□□□□ -2.02
LSM1O15116 COX7BP2-201ENST00000437976 242 ntBASIC2.44□□□□□ -2.02
LSM1O15116 PGBD4P3-201ENST00000440731 581 ntBASIC2.44□□□□□ -2.02
LSM1O15116 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.44□□□□□ -2.02
LSM1O15116 AC113347.3-201ENST00000509113 148 ntBASIC2.44□□□□□ -2.02
LSM1O15116 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.44□□□□□ -2.02
LSM1O15116 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.44□□□□□ -2.02
LSM1O15116 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.44□□□□□ -2.02
LSM1O15116 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.44□□□□□ -2.02
LSM1O15116 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.44□□□□□ -2.02
LSM1O15116 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.44□□□□□ -2.02
LSM1O15116 RPS15AP11-201ENST00000594193 385 ntBASIC2.44□□□□□ -2.02
LSM1O15116 AC112220.2-201ENST00000605513 533 ntBASIC2.44□□□□□ -2.02
LSM1O15116 OR10AB1P-201ENST00000609613 938 ntBASIC2.44□□□□□ -2.02
LSM1O15116 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LSM1O15116 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.44□□□□□ -2.02
LSM1O15116 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LSM1O15116 AL596028.1-201ENST00000326971 197 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms