Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXN3O00409 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXN3O00409 BDH2P1-201ENST00000602288 736 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 AL121992.2-201ENST00000606262 256 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXN3O00409 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
FOXN3O00409 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
FOXN3O00409 MAPK10-373ENST00000641983 6772 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
FOXN3O00409 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
FOXN3O00409 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
FOXN3O00409 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
FOXN3O00409 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
FOXN3O00409 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4□□□□□ -1.77
FOXN3O00409 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4□□□□□ -1.77
FOXN3O00409 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
FOXN3O00409 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
FOXN3O00409 Y_RNA.303-201ENST00000364998 94 ntBASIC4□□□□□ -1.77
FOXN3O00409 RNU5E-6P-201ENST00000365574 115 ntBASIC4□□□□□ -1.77
FOXN3O00409 MIR514A1-201ENST00000385133 98 ntBASIC4□□□□□ -1.77
FOXN3O00409 MIR493-201ENST00000385254 89 ntBASIC4□□□□□ -1.77
FOXN3O00409 RNA5SP424-201ENST00000390988 115 ntBASIC4□□□□□ -1.77
FOXN3O00409 BTF3L4P3-201ENST00000418879 476 ntBASIC4□□□□□ -1.77
FOXN3O00409 RPL27AP8-201ENST00000424277 446 ntBASIC4□□□□□ -1.77
FOXN3O00409 OR2AS1P-201ENST00000427827 319 ntBASIC4□□□□□ -1.77
FOXN3O00409 BNIP3P2-201ENST00000441221 577 ntBASIC4□□□□□ -1.77
FOXN3O00409 TXNP1-201ENST00000441872 371 ntBASIC4□□□□□ -1.77
FOXN3O00409 PSPHP1-201ENST00000450062 261 ntBASIC4□□□□□ -1.77
FOXN3O00409 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4□□□□□ -1.77
FOXN3O00409 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4□□□□□ -1.77
FOXN3O00409 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4□□□□□ -1.77
FOXN3O00409 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4□□□□□ -1.77
FOXN3O00409 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4□□□□□ -1.77
FOXN3O00409 SNORA70.16-201ENST00000516390 95 ntBASIC4□□□□□ -1.77
FOXN3O00409 RNU6-1178P-201ENST00000516674 107 ntBASIC4□□□□□ -1.77
FOXN3O00409 RNU6-1092P-201ENST00000516955 87 ntBASIC4□□□□□ -1.77
FOXN3O00409 OR4R1P-201ENST00000529879 463 ntBASIC4□□□□□ -1.77
FOXN3O00409 AC008011.1-201ENST00000545989 227 ntBASIC4□□□□□ -1.77
FOXN3O00409 CYCSP30-201ENST00000546447 172 ntBASIC4□□□□□ -1.77
FOXN3O00409 RPL23AP84-201ENST00000571193 464 ntBASIC4□□□□□ -1.77
FOXN3O00409 RN7SL703P-201ENST00000578485 302 ntBASIC4□□□□□ -1.77
FOXN3O00409 AC002545.1-201ENST00000592511 181 ntBASIC4□□□□□ -1.77
FOXN3O00409 AC012507.3-201ENST00000603556 477 ntBASIC4□□□□□ -1.77
FOXN3O00409 AL391646.1-201ENST00000603860 190 ntBASIC4□□□□□ -1.77
FOXN3O00409 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4□□□□□ -1.77
FOXN3O00409 AC007014.2-201ENST00000615581 479 ntBASIC4□□□□□ -1.77
FOXN3O00409 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4□□□□□ -1.77
FOXN3O00409 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4□□□□□ -1.77
FOXN3O00409 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
FOXN3O00409 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4□□□□□ -1.77
FOXN3O00409 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4□□□□□ -1.77
FOXN3O00409 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4□□□□□ -1.77
FOXN3O00409 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
FOXN3O00409 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXN3O00409 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
FOXN3O00409 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXN3O00409 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXN3O00409 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
FOXN3O00409 Y_RNA.256-201ENST00000364594 104 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 MIR181A1-201ENST00000385026 110 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
FOXN3O00409 AC068050.1-201ENST00000394891 380 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 RNU6-628P-201ENST00000410675 107 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.99□□□□□ -1.77
FOXN3O00409 SDCBPP3-201ENST00000419629 891 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 AL139247.1-201ENST00000422768 325 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.99□□□□□ -1.77
FOXN3O00409 AC079781.2-201ENST00000446424 169 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 AL671855.1-201ENST00000446875 1203 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 AC003071.1-201ENST00000451219 789 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 RPS20P20-201ENST00000460498 340 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 AC006512.1-201ENST00000468816 291 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 RN7SL432P-201ENST00000484057 298 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 AC105914.1-201ENST00000511798 226 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 ARL2BPP6-201ENST00000512757 439 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXN3O00409 RNU6-1256P-201ENST00000516539 103 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 RNA5SP468-201ENST00000516782 93 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 AP003072.2-201ENST00000527756 676 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.99□□□□□ -1.77
FOXN3O00409 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.99□□□□□ -1.77
FOXN3O00409 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXN3O00409 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXN3O00409 RNU1-30P-201ENST00000606575 163 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
FOXN3O00409 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.99□□□□□ -1.77
FOXN3O00409 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXN3O00409 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXN3O00409 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXN3O00409 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXN3O00409 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXN3O00409 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
FOXN3O00409 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FOXN3O00409 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXN3O00409 AC073073.2-201ENST00000609827 2578 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FOXN3O00409 AL672296.1-201ENST00000427780 2158 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 Y_RNA.22-201ENST00000362492 102 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms