Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RNU6-362P-201ENST00000516736 90 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 IMMP1LP2-201ENST00000552954 492 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 CFL2-206ENST00000556161 546 ntTSL 4 BASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 SUB1P3-201ENST00000564581 315 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 OR4K8P-201ENST00000578842 1048 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 AL109618.2-201ENST00000605527 211 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 AL138478.1-201ENST00000612252 832 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 CR589904.2-201ENST00000612533 440 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 AC012314.7-201ENST00000619693 93 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 AC011330.2-201ENST00000621680 635 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 PISRT1-201ENST00000626175 531 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 CTSLP2-204ENST00000629029 392 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 U6.107-201ENST00000637108 79 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 ZNF663P-202ENST00000641770 1131 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 SNORA67.3-201ENST00000384366 140 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 MIR7-3-201ENST00000384898 110 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 MIR518A2-201ENST00000384966 87 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 BTF3L4P2-201ENST00000392798 346 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 RNU6-516P-201ENST00000411381 104 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC007098.1-201ENST00000420122 367 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 VN1R108P-201ENST00000431580 830 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC024082.2-201ENST00000434771 238 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 MTND2P29-201ENST00000438595 412 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AL049734.2-201ENST00000441066 616 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 RAB11AP1-201ENST00000442978 646 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 RN7SL432P-201ENST00000484057 298 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AL133372.1-201ENST00000493565 745 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC138853.1-201ENST00000503549 823 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC074250.1-201ENST00000511117 192 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC104581.2-201ENST00000572227 430 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AL031274.2-201ENST00000599419 203 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 SNRPGP19-201ENST00000603826 189 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC018638.7-201ENST00000605836 1114 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC068944.2-201ENST00000610373 403 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC025034.2-201ENST00000623264 286 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC068724.3-201ENST00000625906 87 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC092192.1-201ENST00000633154 1018 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AP000776.1-201ENST00000530032 1663 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AL355596.1-201ENST00000565399 3996 ntBASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CHKB-CPT1BH3BT56 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 RNU2-41P-201ENST00000410991 178 ntBASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AC096649.2-201ENST00000416186 393 ntBASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 HMGN1P8-201ENST00000463578 288 ntBASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 RPS20P22-201ENST00000473700 357 ntBASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AC107393.1-201ENST00000512403 346 ntBASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AP004607.1-201ENST00000524456 203 ntBASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AP001646.1-201ENST00000527936 915 ntBASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AC084851.1-201ENST00000529105 249 ntBASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AC005000.2-201ENST00000605468 310 ntBASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AL109659.3-201ENST00000624985 950 ntBASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AC131280.1-202ENST00000624067 4211 ntBASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 AC046144.1-201ENST00000478559 1853 ntBASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
CHKB-CPT1BH3BT56 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 MIR26B-201ENST00000362251 77 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 RNU6-7-201ENST00000364784 107 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 RNU6-8-201ENST00000365467 107 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 RNU6-1151P-201ENST00000384684 107 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms