Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RNU6-1083P-201ENST00000384022 107 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 SNORA7.4-201ENST00000384249 137 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AL139397.2-201ENST00000404529 772 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AL359634.1-202ENST00000404721 284 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 PIGPP2-201ENST00000411569 458 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 CYCSP19-201ENST00000411715 316 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 RPL26P27-201ENST00000414397 437 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 SEPT2P1-201ENST00000419651 180 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 MTCO3P30-201ENST00000426425 670 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AL445669.1-201ENST00000426743 755 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 HMGN2P31-201ENST00000432430 273 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC005094.1-201ENST00000440420 368 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC117440.1-201ENST00000474107 571 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 MTND5P4-201ENST00000514978 288 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 RN7SKP272-201ENST00000516988 232 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 RNA5SP165-201ENST00000517142 115 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 TRMT10BP1-201ENST00000519377 943 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC009163.5-201ENST00000575421 637 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC012493.2-201ENST00000595083 291 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC024153.1-201ENST00000603103 365 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC098826.3-201ENST00000603823 466 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AL161798.1-201ENST00000604630 131 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AL158042.1-201ENST00000605338 460 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC097468.3-201ENST00000607956 456 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC072039.2-201ENST00000608883 439 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC103710.1-201ENST00000610003 901 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AL589743.7-201ENST00000612637 233 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC012150.2-201ENST00000621300 544 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 MIR3199-2-201ENST00000636243 86 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC080128.1-201ENST00000474389 1917 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC092447.7-201ENST00000422212 1621 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 MTND5P1-201ENST00000445440 1375 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 MTND4P27-201ENST00000450813 1354 ntBASIC2.08□□□□□ -2.08
SMKR1H3BMG3 AC092125.1-201ENST00000562568 1995 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.07□□□□□ -2.08
SMKR1H3BMG3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SMKR1H3BMG3 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SMKR1H3BMG3 RNU2-68P-201ENST00000410878 191 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 ELOCP9-201ENST00000418624 239 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.07□□□□□ -2.08
SMKR1H3BMG3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.07□□□□□ -2.08
SMKR1H3BMG3 AC004975.1-201ENST00000428733 208 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.07□□□□□ -2.08
SMKR1H3BMG3 AC093156.1-201ENST00000440382 670 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 RNU7-26P-201ENST00000458980 63 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 RN7SL385P-201ENST00000468873 276 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 AC003982.1-202ENST00000469928 248 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
SMKR1H3BMG3 TRBV1-201ENST00000476502 284 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 RN7SL293P-201ENST00000481765 281 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.07□□□□□ -2.08
SMKR1H3BMG3 AC110794.1-201ENST00000505816 425 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 TBCAP3-201ENST00000512475 312 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 AC091826.1-201ENST00000514065 313 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 RNU1-103P-201ENST00000516502 125 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 SCARNA13-201ENST00000516672 275 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 RNU6-826P-201ENST00000516827 104 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.07□□□□□ -2.08
SMKR1H3BMG3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.07□□□□□ -2.08
SMKR1H3BMG3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.07□□□□□ -2.08
SMKR1H3BMG3 MRPS36P5-201ENST00000551909 298 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.07□□□□□ -2.08
SMKR1H3BMG3 NCAPGP2-201ENST00000557911 754 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 AC135628.1-201ENST00000568867 534 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 AC136618.2-201ENST00000575091 400 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.07□□□□□ -2.08
SMKR1H3BMG3 MIR5194-201ENST00000582634 120 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 MIR4658-201ENST00000584344 65 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 RPP40P2-201ENST00000603596 712 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 DPPA3P3-201ENST00000603842 430 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SMKR1H3BMG3 AC106052.1-201ENST00000608029 497 ntBASIC2.07□□□□□ -2.08
SMKR1H3BMG3 OR10AB1P-201ENST00000609613 938 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms