Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 SNORA31.13-201ENST00000516624 135 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 AC024224.1-201ENST00000538284 609 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 AK6P1-201ENST00000540219 478 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 AC068338.1-201ENST00000565567 176 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 MIR4648-201ENST00000580107 72 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 AC126118.1-201ENST00000607744 628 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 AC106052.1-201ENST00000608029 497 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 MKKS-204ENST00000639674 192 ntBASIC1.34□□□□□ -2.19
TCRBV3S1A0A5B6 ELF2P3-201ENST00000445099 1506 ntBASIC1.34□□□□□ -2.2
TCRBV3S1A0A5B6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.2
TCRBV3S1A0A5B6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
TCRBV3S1A0A5B6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 AC080128.1-201ENST00000474389 1917 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 MIR421-201ENST00000365696 85 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 AL627390.1-201ENST00000396055 340 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 AL356432.1-201ENST00000405809 419 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 RNU6-1140P-201ENST00000410517 106 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 TATDN1P1-201ENST00000414123 891 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 MTCO3P46-201ENST00000425787 232 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 GTF2IP20-201ENST00000431663 360 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 AC092573.2-201ENST00000434546 243 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 RAB11AP1-201ENST00000442978 646 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 AC233982.1-201ENST00000451247 436 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 RNU1-98P-201ENST00000458992 160 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 DYNLL1P5-201ENST00000467158 270 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 AP005639.2-201ENST00000527592 928 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 HSBP1P1-201ENST00000555205 166 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 AC073968.1-201ENST00000618594 637 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 TPTE2P4-201ENST00000258589 1605 ntBASIC1.33□□□□□ -2.2
TCRBV3S1A0A5B6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 Y_RNA.510-201ENST00000384511 114 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 RNU6-1328P-201ENST00000410938 106 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 AIMP1P2-201ENST00000425294 312 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 Z80107.1-201ENST00000436830 412 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 BNIP3P2-201ENST00000441221 577 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 AC124916.1-201ENST00000444020 547 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 Z82190.1-201ENST00000454534 490 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 AL121769.1-201ENST00000469473 401 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 AL049873.1-201ENST00000480540 376 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 AC140059.1-201ENST00000489238 361 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 AC108043.1-201ENST00000512696 574 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 RNU6-202P-201ENST00000515998 96 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 RNU6-970P-201ENST00000516312 107 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 RNU6-928P-201ENST00000516876 104 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 HMGB1P1-201ENST00000522557 636 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 AP003399.1-201ENST00000637534 361 ntBASIC1.32□□□□□ -2.2
TCRBV3S1A0A5B6 RNA5SP276-201ENST00000362580 94 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 RNU6-441P-201ENST00000384545 106 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 MIR147B-201ENST00000390185 80 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 AL354695.1-201ENST00000427935 228 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 FO393419.3-201ENST00000428741 282 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 HSPE1P24-201ENST00000450782 238 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 AC104073.1-201ENST00000451988 151 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 PCNAP1-201ENST00000505363 709 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 SLC25A15P5-201ENST00000508033 253 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 AC112518.2-201ENST00000508565 425 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 RNU6-491P-201ENST00000516099 110 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 OR5AL2P-201ENST00000532185 920 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms