Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV3A0A0B4J244 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
TRAV3A0A0B4J244 AL590099.1-201ENST00000615276 138 ntBASIC1.55□□□□□ -2.16
TRAV3A0A0B4J244 AC090772.4-201ENST00000623599 362 ntBASIC1.55□□□□□ -2.16
TRAV3A0A0B4J244 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV3A0A0B4J244 MIR203B-201ENST00000636080 86 ntBASIC1.55□□□□□ -2.16
TRAV3A0A0B4J244 MIR219B-201ENST00000637023 88 ntBASIC1.55□□□□□ -2.16
TRAV3A0A0B4J244 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.55□□□□□ -2.16
TRAV3A0A0B4J244 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV3A0A0B4J244 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV3A0A0B4J244 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
TRAV3A0A0B4J244 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AL049641.1-201ENST00000441055 1948 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AC083799.1-201ENST00000366451 910 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AL355615.1-201ENST00000406187 641 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 RN7SKP223-201ENST00000410582 62 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 RNA5SP489-201ENST00000410986 109 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 SPA17P1-201ENST00000416656 452 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AC092047.1-201ENST00000424997 240 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AL592447.1-201ENST00000447592 540 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AC092155.2-201ENST00000454675 477 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 UBL5P3-201ENST00000475112 231 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 SNORA48.10-201ENST00000516965 160 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 RNA5SP135-201ENST00000517019 125 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 HMGN1P28-201ENST00000521340 364 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AC104984.5-201ENST00000586878 94 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AL449363.1-201ENST00000617815 186 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 DBF4P1-201ENST00000412976 1892 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 AL109809.4-201ENST00000603520 2185 ntBASIC1.54□□□□□ -2.16
TRAV3A0A0B4J244 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 RNU6-253P-201ENST00000384730 105 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 AC016769.3-201ENST00000396562 315 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 RPS3AP24-201ENST00000407896 734 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 SNORA3.2-201ENST00000408221 125 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 RNU6-920P-201ENST00000410926 92 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 AL139415.2-201ENST00000431968 163 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 FAM103A2P-201ENST00000444122 354 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 CDC42P1-201ENST00000456658 548 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 RPL32P14-201ENST00000463196 378 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 RN7SL274P-201ENST00000492268 272 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 AC106872.3-201ENST00000495104 446 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 KLRA1P-201ENST00000503499 986 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 AC008549.1-201ENST00000512900 643 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 OR11H5P-201ENST00000554039 926 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 AL138976.2-201ENST00000563989 694 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 AGGF1P5-201ENST00000567900 919 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 ADAM3B-201ENST00000569937 840 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 MIR4648-201ENST00000580107 72 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 AL022067.1-201ENST00000602426 454 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 AC087241.4-201ENST00000612441 480 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 RMST_10.1-201ENST00000616309 154 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 AC010329.5-201ENST00000623497 2174 ntBASIC1.53□□□□□ -2.16
TRAV3A0A0B4J244 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 FAM133CP-201ENST00000332869 704 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 RNU6-878P-201ENST00000384578 110 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 RNU2-47P-201ENST00000410649 186 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms