Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC109464.2-201ENST00000510242 943 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AC117525.1-201ENST00000515228 503 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AC074029.2-201ENST00000551045 634 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AC015720.1-201ENST00000565251 277 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AC010615.3-201ENST00000597319 394 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AC013468.1-201ENST00000608680 598 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AL161423.1-201ENST00000613700 262 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AC021755.4-201ENST00000616620 456 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AL356473.1-201ENST00000406203 1408 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 RNU6-525P-201ENST00000363685 104 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 RNU6-821P-201ENST00000390995 107 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 CISD1P1-201ENST00000393907 327 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 SSXP10-201ENST00000402595 565 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 RPL7P29-201ENST00000437151 728 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AL500527.1-201ENST00000448532 255 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 RNU7-23P-201ENST00000459465 62 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AC008481.1-201ENST00000463278 396 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 KLF3P2-201ENST00000465138 268 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AC055855.1-201ENST00000489563 579 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 KATNBL1P4-201ENST00000503545 918 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AC098862.1-201ENST00000504991 413 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AP005902.1-201ENST00000521358 186 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 HSBP1P1-201ENST00000555205 166 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AL109918.3-201ENST00000603072 338 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AC012669.1-201ENST00000603209 283 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AL450336.1-201ENST00000605180 586 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AC135507.1-201ENST00000607214 561 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AC117490.2-201ENST00000610042 594 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 RMST_6.1-201ENST00000611980 203 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 AC004852.3-201ENST00000614131 326 ntBASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
TRAV1-2A0A0B4J238 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 MTND4LP20-201ENST00000402379 270 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 Z80107.1-201ENST00000436830 412 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AC007677.1-201ENST00000445757 515 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 MTND2P19-201ENST00000449129 1012 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 MRPL35P4-201ENST00000453682 566 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 RPL23AP42-201ENST00000471152 471 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AC008885.2-201ENST00000509506 930 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 RNU6-295P-201ENST00000516901 104 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AP003033.1-201ENST00000527244 415 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AL442163.2-201ENST00000553912 710 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AC091544.4-201ENST00000555268 342 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AC023813.2-201ENST00000564321 469 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AC011260.1-201ENST00000578420 472 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AC022662.1-201ENST00000580252 331 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AC011494.1-201ENST00000596454 237 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AL035411.2-201ENST00000604022 421 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AP005212.4-201ENST00000614206 710 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AC090116.1-201ENST00000615679 446 ntBASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.12□□□□□ -2.23
TRAV1-2A0A0B4J238 DDX10P1-201ENST00000448545 1933 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 U8.14-201ENST00000390843 143 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 RNU6-220P-201ENST00000390919 107 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 SNORA26.9-201ENST00000391322 122 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 RNU6-1328P-201ENST00000410938 106 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 FCF1P2-201ENST00000415284 583 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 HMGB1P31-201ENST00000437242 427 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 FGF7P5-201ENST00000441829 291 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 RPS29P29-201ENST00000456396 171 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 UBE2DNL-203ENST00000474922 222 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 RPS15AP36-201ENST00000492022 382 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 AC025459.1-201ENST00000504072 156 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 SNORA31.25-201ENST00000517242 134 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 AC040174.2-201ENST00000602701 465 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 AL354950.1-201ENST00000614150 568 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms