Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AL136313.1-201ENST00000624804 202 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 ZNF285B-201ENST00000561698 1767 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 HSPE1P11-201ENST00000339579 310 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AC067945.1-201ENST00000342609 618 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 RNU6-1120P-201ENST00000362988 108 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 SNORA63-201ENST00000363450 132 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 RNU5E-8P-201ENST00000363502 116 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 SNORD74.4-201ENST00000364129 80 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 Y_RNA.356-201ENST00000365475 113 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 MIR1302-11-201ENST00000408051 138 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 MIR1302-9-201ENST00000408365 138 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 SNORA3.3-201ENST00000408712 125 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 MIR1302-10-201ENST00000408734 138 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AMD1P2-201ENST00000412936 992 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AC093578.1-201ENST00000415219 368 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 UBE2FP1-201ENST00000416536 447 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AC093019.1-201ENST00000443135 252 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AL162389.1-201ENST00000449233 177 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 PPIAP15-201ENST00000479662 484 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 RPL39P36-201ENST00000490784 156 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 PPBPP1-201ENST00000510807 373 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 RNA5SP309-201ENST00000516670 106 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 RNU7-143P-201ENST00000516781 65 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 Y_RNA.704-201ENST00000516851 102 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 RNU6-1073P-201ENST00000517182 106 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 RNA5SP179-201ENST00000517284 121 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 HPRT1P3-201ENST00000539521 576 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 CBX3P5-201ENST00000552017 521 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 RPL21P12-201ENST00000559810 515 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AC025678.1-201ENST00000567861 338 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 GLUD1P4-201ENST00000590914 418 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 MIR1302-2-201ENST00000607096 138 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 TUG1_2.1-201ENST00000614234 87 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AL450472.3-201ENST00000615578 367 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AL034408.1-202ENST00000636088 415 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 MIR4275-201ENST00000636486 87 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 AC009093.8-201ENST00000641769 292 ntBASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC187A0A096LP49 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 RNU6-600P-201ENST00000362524 99 ntBASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 RNU4-79P-201ENST00000362764 141 ntBASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 RNU6-1074P-201ENST00000383995 104 ntBASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 Y_RNA.460-201ENST00000384255 102 ntBASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 RNU6-882P-201ENST00000391025 103 ntBASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 RPS4XP8-201ENST00000402039 771 ntBASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 AL353193.1-201ENST00000421444 268 ntBASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 AC004866.2-201ENST00000438285 481 ntBASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 RAD23BP3-201ENST00000454157 1152 ntBASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 HMGN1P13-201ENST00000505795 138 ntBASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 LRRC34P2-201ENST00000514850 553 ntBASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 RNU1-95P-201ENST00000516357 160 ntBASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 RNU7-51P-201ENST00000516560 62 ntBASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 RNU1-128P-201ENST00000516704 160 ntBASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 AC100870.1-201ENST00000522035 505 ntBASIC3.8□□□□□ -1.8
CCDC187A0A096LP49 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms