Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AP006248.3-201ENST00000623580 594 ntBASIC1.95□□□□□ -2.1
SCN10AQ9Y5Y9 AC012321.1-201ENST00000561622 1588 ntBASIC1.95□□□□□ -2.1
SCN10AQ9Y5Y9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SCN10AQ9Y5Y9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 RNU6-707P-201ENST00000364647 95 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 UBE2V1P13-201ENST00000436983 439 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 AC009296.1-201ENST00000443146 155 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 AL359385.1-201ENST00000456509 365 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 RPS27P23-201ENST00000487608 251 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 AC006390.1-201ENST00000508068 283 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 HIGD1AP6-201ENST00000521833 279 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 AC079791.1-201ENST00000605356 973 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 VN1R74P-201ENST00000613259 503 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 CKAP2P1-201ENST00000555477 2049 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 SNORA25.9-201ENST00000365087 128 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 RPL7P37-201ENST00000425095 738 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 ZNF965P-201ENST00000432501 817 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 RAB11AP1-201ENST00000442978 646 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 AL139109.1-201ENST00000455491 297 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 CDC42P1-201ENST00000456658 548 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 MRPL42P6-201ENST00000486397 371 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 AC117532.1-201ENST00000514638 323 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 RNU6-1095P-201ENST00000516148 108 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 RPS3AP4-201ENST00000555161 764 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 AC023824.2-201ENST00000566185 400 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 KATNBL1P1-201ENST00000605192 748 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 BX649567.1-201ENST00000642071 1134 ntBASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SCN10AQ9Y5Y9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 UBE2L2-201ENST00000254302 429 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 RNU6-252P-201ENST00000363232 107 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 Y_RNA.796-201ENST00000364268 102 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 Y_RNA.799-201ENST00000364992 102 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 RNU6-198P-201ENST00000384258 104 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 SNORD51-201ENST00000384320 80 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 USP9YP15-201ENST00000442391 422 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 RNU6-420P-201ENST00000458780 107 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AC140059.1-201ENST00000489238 361 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 RPL37P25-201ENST00000507308 276 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AL359273.1-201ENST00000510918 627 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AC113155.1-201ENST00000511141 769 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 RNU6-1053P-201ENST00000515930 101 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AC008676.3-201ENST00000521237 435 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AP002826.1-201ENST00000608835 315 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 MTCO1P6-201ENST00000481192 1384 ntBASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.93□□□□□ -2.1
SCN10AQ9Y5Y9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 Y_RNA.116-201ENST00000363292 103 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 RNA5SP27-201ENST00000363839 119 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 RNA5SP138-201ENST00000365098 114 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 RNU6-40P-201ENST00000384254 107 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 MIR1323-201ENST00000408090 73 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 USP9YP27-201ENST00000418455 438 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 NDUFA5P4-201ENST00000436704 385 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AL589880.1-201ENST00000448271 287 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 OR51B8P-201ENST00000449892 769 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AC234775.1-201ENST00000454247 670 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 MTCO1P42-201ENST00000457379 726 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 CASP1P1-201ENST00000526345 212 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 VN1R88P-201ENST00000596787 292 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AL035411.2-201ENST00000604022 421 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AL359821.1-201ENST00000605519 182 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AC097504.2-201ENST00000608088 454 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AL121594.5-201ENST00000631724 573 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 MTND2P41-201ENST00000637599 773 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 RNY1P10-201ENST00000363268 113 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 UBE2V1P11-201ENST00000411559 285 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 230.7 ms