Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.31□□□□□ -2.2
AP4S1Q9Y587 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.31□□□□□ -2.2
AP4S1Q9Y587 MIR4648-201ENST00000580107 72 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AC025588.2-201ENST00000604851 466 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AC009318.2-201ENST00000610917 651 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AC004852.3-201ENST00000614131 326 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AL449363.1-201ENST00000617815 186 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 MIR7843-201ENST00000622274 79 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AP003072.5-201ENST00000623872 773 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.31□□□□□ -2.2
AP4S1Q9Y587 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
AP4S1Q9Y587 CCT4P2-201ENST00000233836 1548 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
AP4S1Q9Y587 MIR504-201ENST00000385065 83 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 AL033519.2-201ENST00000403958 392 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 PRRC2CP1-201ENST00000404428 159 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.3□□□□□ -2.2
AP4S1Q9Y587 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.3□□□□□ -2.2
AP4S1Q9Y587 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.3□□□□□ -2.2
AP4S1Q9Y587 EZH2P1-201ENST00000431167 291 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
AP4S1Q9Y587 UBE2D3P1-201ENST00000436669 444 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 HMGN2P10-201ENST00000448085 265 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 AC087884.1-201ENST00000469738 328 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.3□□□□□ -2.2
AP4S1Q9Y587 TPT1P8-201ENST00000510120 555 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 RN7SKP179-201ENST00000516126 217 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 RNU1-103P-201ENST00000516502 125 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 AC027309.2-201ENST00000520566 192 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.3□□□□□ -2.2
AP4S1Q9Y587 AC024224.1-201ENST00000538284 609 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.3□□□□□ -2.2
AP4S1Q9Y587 MTCYBP28-201ENST00000566728 1132 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 FAM60BP-201ENST00000578364 658 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 MIR4672-201ENST00000583126 81 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.3□□□□□ -2.2
AP4S1Q9Y587 AC005498.1-201ENST00000592125 465 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 AC005034.5-201ENST00000604219 466 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 AC006338.1-201ENST00000618453 749 ntBASIC1.3□□□□□ -2.2
AP4S1Q9Y587 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.29□□□□□ -2.2
AP4S1Q9Y587 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
AP4S1Q9Y587 RNU6-1074P-201ENST00000383995 104 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 RNU1-148P-201ENST00000384472 162 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 RNA5SP508-201ENST00000411327 119 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 AL109913.1-201ENST00000421173 514 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 GTF2IP20-201ENST00000431663 360 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 AC124916.1-201ENST00000444020 547 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 snoU109.1-201ENST00000459339 135 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.29□□□□□ -2.2
AP4S1Q9Y587 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
AP4S1Q9Y587 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.29□□□□□ -2.2
AP4S1Q9Y587 SCARNA17.1-201ENST00000516211 143 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 SCARNA17.2-201ENST00000516334 143 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.29□□□□□ -2.2
AP4S1Q9Y587 MTCYBP23-201ENST00000558717 1102 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 AC068338.1-201ENST00000565567 176 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 MIR4504-201ENST00000577413 92 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 MIR5571-201ENST00000577998 113 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 MIR4435-1-201ENST00000582552 80 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.29□□□□□ -2.2
AP4S1Q9Y587 AC073111.2-201ENST00000605657 1075 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 SCARNA17.4-201ENST00000614296 143 ntBASIC1.29□□□□□ -2.2
AP4S1Q9Y587 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
AP4S1Q9Y587 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 RNU6-270P-201ENST00000364131 105 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC016769.3-201ENST00000396562 315 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 HMGB1P49-201ENST00000418882 569 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC244453.4-201ENST00000419150 388 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC246680.2-201ENST00000422106 389 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC003685.2-201ENST00000422795 395 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AL513185.2-201ENST00000425543 193 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC244035.1-201ENST00000430042 390 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC092573.2-201ENST00000434546 243 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 BNIP3P2-201ENST00000441221 577 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC069306.1-201ENST00000507006 843 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 SNORA70.16-201ENST00000516390 95 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 SNORA31.24-201ENST00000517232 57 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 OR5AL2P-201ENST00000532185 920 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 CBX3P7-201ENST00000532876 502 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC084033.1-201ENST00000550830 633 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC021749.1-201ENST00000604322 607 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC010872.1-201ENST00000624225 675 ntBASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.28□□□□□ -2.2
AP4S1Q9Y587 AC025263.3-201ENST00000622965 1396 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms