Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 AL359893.1-201ENST00000447628 1580 ntBASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 SNORA62-201ENST00000365493 153 ntBASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 RNU6-1109P-201ENST00000391187 107 ntBASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 RNA5SP111-201ENST00000411386 101 ntBASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 RPL36AP10-201ENST00000421785 322 ntBASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 CKS1BP6-201ENST00000424932 240 ntBASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 HMGB3P30-201ENST00000457863 606 ntBASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 SCARNA10-201ENST00000459255 330 ntBASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 AC008481.1-201ENST00000463278 396 ntBASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 AC010631.1-201ENST00000474150 156 ntBASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 AC116655.1-201ENST00000508324 901 ntBASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 AC100812.1-201ENST00000607622 580 ntBASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 SNHG22-203ENST00000617833 660 ntBASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 AL161637.1-201ENST00000622380 412 ntBASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 AC067931.1-201ENST00000624190 671 ntBASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHMP3Q9Y3E7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 HSPA8P4-201ENST00000511877 1920 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 RNU6-989P-201ENST00000362756 107 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 DEFB109C-201ENST00000382575 264 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 DEFB109B-201ENST00000382656 264 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 RNU6-128P-201ENST00000383976 107 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 Y_RNA.428-201ENST00000384078 102 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 RNU6-339P-201ENST00000384310 107 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AL603908.1-201ENST00000406098 201 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 RPS4XP7-201ENST00000406274 780 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AC092809.3-201ENST00000415453 231 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 EIF4EP1-201ENST00000422311 642 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 RPS12P5-201ENST00000423449 371 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 MRPS18CP6-201ENST00000423587 223 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AL732292.1-201ENST00000426692 226 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AL591212.2-201ENST00000433923 257 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 SUMO1P3-201ENST00000439961 304 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 RPL7L1P1-201ENST00000448259 785 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 TPT1P12-201ENST00000448968 492 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AC026979.1-201ENST00000492525 396 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AC100870.1-201ENST00000522035 505 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 MIR4697-201ENST00000582977 78 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AC011494.1-201ENST00000596454 237 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AL670379.6-201ENST00000603753 252 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AL670379.1-201ENST00000604752 252 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AL670379.5-201ENST00000605253 252 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AL670379.8-201ENST00000605353 252 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AL670379.7-201ENST00000605823 252 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AC116447.1-201ENST00000613153 453 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AC004696.1-201ENST00000614345 607 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 AC093535.2-201ENST00000624769 2326 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 OR56B2P-202ENST00000641377 2453 ntBASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHMP3Q9Y3E7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CHMP3Q9Y3E7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.71□□□□□ -1.49
CHMP3Q9Y3E7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CHMP3Q9Y3E7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
CHMP3Q9Y3E7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 Y_RNA.257-201ENST00000364596 102 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 Y_RNA.396-201ENST00000383949 103 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 RNU6-823P-201ENST00000391042 103 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 AC092447.6-201ENST00000414578 210 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 USMG5P1-201ENST00000425964 177 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 PSMA2P3-201ENST00000429685 675 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 GEMIN8P3-201ENST00000445417 720 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 AC092451.1-201ENST00000480211 153 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 AC093840.1-201ENST00000511599 336 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 AC104136.1-201ENST00000512969 394 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 CR383656.7-201ENST00000548164 174 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 AL356218.2-201ENST00000605264 187 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 SNORD58B-201ENST00000607313 66 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 AC062037.2-201ENST00000610137 73 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 TUG1_2.1-201ENST00000614234 87 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 AC083809.1-201ENST00000615051 472 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 AC078938.1-201ENST00000620993 318 ntBASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CHMP3Q9Y3E7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms