Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 BNIP3P24-201ENST00000593398 557 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 RPS15AP11-201ENST00000594193 385 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AL356280.1-201ENST00000603614 379 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AL121917.1-203ENST00000605534 577 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AC103710.4-201ENST00000609301 899 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AC107294.1-201ENST00000609524 467 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 HMGB1P24-202ENST00000615653 685 ntBASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.96□□□□□ -2.1
HDGFL3Q9Y3E1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 MIR16-2-201ENST00000362117 81 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AL592310.1-201ENST00000414330 671 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AL121882.1-201ENST00000422893 417 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 MYL8P-204ENST00000431574 518 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 MTCO3P43-201ENST00000440974 771 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 VN1R10P-201ENST00000447106 875 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AC104090.1-201ENST00000506341 1171 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 SCARNA15.2-201ENST00000516409 127 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AC009127.3-201ENST00000570531 403 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 LRRC37A5P-203ENST00000580181 585 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AC124283.4-201ENST00000581815 456 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 MIR3616-201ENST00000584070 92 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 DUXAP11-201ENST00000603858 526 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AP003973.1-201ENST00000604639 691 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AL450472.3-201ENST00000615578 367 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AC064859.1-201ENST00000624741 174 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 U6.101-201ENST00000637707 76 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 AC009902.3-201ENST00000606235 2172 ntBASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HDGFL3Q9Y3E1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AC007785.2-201ENST00000598627 1916 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 RNU6-492P-201ENST00000363035 104 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 SUGT1P1-201ENST00000379514 476 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 RNU6-301P-201ENST00000384277 107 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 SNORA11.4-201ENST00000408823 129 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 HMGN2P38-201ENST00000423806 265 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AC007742.1-201ENST00000425789 329 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 MTCO3P30-201ENST00000426425 670 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AL035407.1-201ENST00000429211 571 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 ELOCP26-201ENST00000436067 329 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 IFNA11P-201ENST00000446352 526 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AC104435.1-201ENST00000483483 166 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AC109486.1-201ENST00000486833 374 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AC090255.1-201ENST00000495779 349 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AC008427.1-201ENST00000503102 655 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 SNORA31.18-201ENST00000517043 134 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AC068313.1-201ENST00000604028 1008 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AP001521.1-201ENST00000609150 300 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 MIR6840-201ENST00000611937 71 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AL445493.3-201ENST00000619568 477 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 AC004009.2-201ENST00000623016 728 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 MIR7515-201ENST00000637837 67 ntBASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
HDGFL3Q9Y3E1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 MIR514A1-201ENST00000385133 98 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 RNU4-72P-201ENST00000410754 173 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 RN7SKP192-201ENST00000411291 327 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 AC019178.2-201ENST00000423595 505 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 AC092047.1-201ENST00000424997 240 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 MTND2P5-201ENST00000432656 1006 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 BNIP3P2-201ENST00000441221 577 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 AL139109.1-201ENST00000455491 297 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 MTND2P30-201ENST00000456663 382 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms