Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 RNU1-75P-201ENST00000347264 129 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 RNU6-754P-201ENST00000391166 107 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 RNU6-516P-201ENST00000411381 104 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 RPL23AP39-201ENST00000415533 405 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC005005.2-201ENST00000420779 380 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 MTATP6P4-201ENST00000427725 675 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC006445.2-201ENST00000510061 472 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC007954.1-201ENST00000554198 494 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 MIR544B-201ENST00000582372 78 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AL139039.1-201ENST00000401900 692 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 RPS3AP24-201ENST00000407896 734 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 RNU2-52P-201ENST00000410680 190 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC090774.1-201ENST00000435925 246 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 FAM103A2P-201ENST00000444122 354 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC098826.2-201ENST00000452011 651 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 OR6K1P-201ENST00000456766 971 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC103710.4-201ENST00000609301 899 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC008121.2-201ENST00000614647 523 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC008443.7-201ENST00000622195 246 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC090740.1-201ENST00000623193 2262 ntBASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM4Q9ULL8 AC009902.3-201ENST00000606235 2172 ntBASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 RNU6-223P-201ENST00000362830 107 ntBASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 RNU6-76P-201ENST00000384060 104 ntBASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 RNA5SP107-201ENST00000411358 122 ntBASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 AL359704.1-201ENST00000411586 781 ntBASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 TPMTP3-201ENST00000411928 735 ntBASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 AP000936.2-201ENST00000447151 681 ntBASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 AL162389.1-201ENST00000449233 177 ntBASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 RNU6-1129P-201ENST00000515964 104 ntBASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 SNORA64.4-201ENST00000516632 81 ntBASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 AP000873.5-201ENST00000533906 236 ntBASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SHROOM4Q9ULL8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 AC011460.1-201ENST00000636268 1834 ntBASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 AL049545.1-201ENST00000401856 572 ntBASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 SNORA3.2-201ENST00000408221 125 ntBASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 MIR1290-201ENST00000408735 78 ntBASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 AC007390.1-201ENST00000415722 356 ntBASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 AC011233.1-201ENST00000422812 283 ntBASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 AP1S2P1-201ENST00000457344 379 ntBASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 ERHP1-201ENST00000523006 310 ntBASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 AC004067.1-201ENST00000608733 700 ntBASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 AC019226.1-201ENST00000625666 515 ntBASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 AC093831.2-201ENST00000624393 3427 ntBASIC5.43□□□□□ -1.54
SHROOM4Q9ULL8 DDX10P1-201ENST00000448545 1933 ntBASIC5.42□□□□□ -1.54
SHROOM4Q9ULL8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC5.42□□□□□ -1.54
SHROOM4Q9ULL8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.42□□□□□ -1.54
SHROOM4Q9ULL8 RN7SL442P-201ENST00000473804 320 ntBASIC5.42□□□□□ -1.54
SHROOM4Q9ULL8 SNORA70.16-201ENST00000516390 95 ntBASIC5.42□□□□□ -1.54
SHROOM4Q9ULL8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.42□□□□□ -1.54
SHROOM4Q9ULL8 COX6CP3-201ENST00000580869 223 ntBASIC5.42□□□□□ -1.54
SHROOM4Q9ULL8 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
SHROOM4Q9ULL8 AC105224.1-201ENST00000587055 421 ntBASIC5.42□□□□□ -1.54
SHROOM4Q9ULL8 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.42□□□□□ -1.54
SHROOM4Q9ULL8 AC107214.2-201ENST00000608204 634 ntBASIC5.42□□□□□ -1.54
SHROOM4Q9ULL8 AC091965.5-201ENST00000624785 342 ntBASIC5.42□□□□□ -1.54
SHROOM4Q9ULL8 AC007671.2-201ENST00000637344 619 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms