Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AL024474.1-201ENST00000404655 591 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 EIF4A1P3-201ENST00000411521 244 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AC011742.1-201ENST00000431448 434 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AC093156.1-201ENST00000440382 670 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AC107399.1-201ENST00000451226 265 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 MTCO3P10-201ENST00000455912 772 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AC069499.1-201ENST00000489433 509 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 ALDH7A1P3-201ENST00000492517 345 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 RN7SKP24-201ENST00000515888 284 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AC053481.3-201ENST00000577881 843 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 MIR5583-1-201ENST00000580941 59 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AL022099.1-201ENST00000604551 712 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 HMGB1P50-201ENST00000605814 607 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AC092807.2-201ENST00000609367 243 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AC245517.5-201ENST00000611529 162 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AL442067.1-201ENST00000613261 223 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AL773545.4-201ENST00000637262 310 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AL513478.4-201ENST00000641636 310 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 LINC02471-203ENST00000641941 4752 ntBASIC4□□□□□ -1.77
PACSIN3Q9UKS6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4□□□□□ -1.77
PACSIN3Q9UKS6 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC027287.1-201ENST00000553115 1453 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC130650.2-201ENST00000618736 2403 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 HSPE1P11-201ENST00000339579 310 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 RNU6-97P-201ENST00000363387 104 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 Y_RNA.148-201ENST00000363557 117 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 RNA5SP322-201ENST00000363617 119 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 RNU6-1029P-201ENST00000384109 107 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 RNU6-784P-201ENST00000384330 106 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 Y_RNA.530-201ENST00000384587 101 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 RNU6-146P-201ENST00000384602 108 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 UBE2V1P2-201ENST00000397758 440 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 MIR1179-201ENST00000408703 91 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 RN7SKP158-201ENST00000410453 326 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC074085.1-201ENST00000413598 418 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AL031736.2-201ENST00000426573 787 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 PSMA6P3-201ENST00000428242 164 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 MTCYBP9-201ENST00000431021 303 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 SNRPEP4-201ENST00000435815 279 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AF228730.2-201ENST00000438784 848 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC020550.1-201ENST00000447385 163 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 RPL7P52-201ENST00000449200 742 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC104073.1-201ENST00000451988 151 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 MTND1P9-201ENST00000453775 944 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 RPL30P15-201ENST00000457129 321 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 RNU7-180P-201ENST00000459240 63 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AP001992.1-205ENST00000462248 379 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC053481.1-201ENST00000467217 306 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 RN7SL303P-201ENST00000469773 251 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC126389.1-201ENST00000477436 290 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC005726.1-201ENST00000494679 427 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 TRBVA-201ENST00000498804 316 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC091885.1-201ENST00000506658 268 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 RNU6-794P-201ENST00000517261 64 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 RANP9-201ENST00000519957 271 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC109635.4-202ENST00000531666 412 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC107016.1-201ENST00000550463 337 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 NF1P5-201ENST00000588287 448 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 BNIP3P25-201ENST00000596023 559 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 MIR6716-201ENST00000613413 80 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC067931.1-201ENST00000624190 671 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC011460.1-201ENST00000636268 1834 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 AC244517.1-201ENST00000606030 2086 ntBASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
PACSIN3Q9UKS6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms