Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MIR4528-201ENST00000577763 90 ntBASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 COX6CP3-201ENST00000580869 223 ntBASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 MIR4276-201ENST00000584832 70 ntBASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 UBE2L4-201ENST00000587688 464 ntBASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 AC067852.3-201ENST00000589177 561 ntBASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 DUXAP4-201ENST00000603046 613 ntBASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 AC091805.2-201ENST00000603848 235 ntBASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 AL158211.4-201ENST00000606988 584 ntBASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 AC090970.3-201ENST00000612566 866 ntBASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 PLCE1P1-201ENST00000622094 305 ntBASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 AL158801.5-201ENST00000623123 465 ntBASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 AC084035.1-201ENST00000634543 607 ntBASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HDAC6Q9UBN7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 MTND5P29-201ENST00000458676 1807 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 Z83843.1-201ENST00000604070 3685 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 AL138713.1-201ENST00000624026 2130 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 AL353746.1-201ENST00000566293 6881 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 RNA5SP374-201ENST00000362939 125 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 RNU4-75P-201ENST00000364621 146 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 RNU6-637P-201ENST00000384050 107 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 Y_RNA.505-201ENST00000384489 102 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 RNU6-297P-201ENST00000384636 107 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 C1DP2-201ENST00000418167 426 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 RPL21P112-201ENST00000434403 463 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 AC055855.1-201ENST00000489563 579 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 AC022483.1-201ENST00000514020 567 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 AC012669.1-201ENST00000603209 283 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 AC073648.5-201ENST00000603502 305 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 AC092447.7-201ENST00000422212 1621 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 MFSD8-233ENST00000641482 4860 ntBASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HDAC6Q9UBN7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 RNU5A-8P-201ENST00000364102 114 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 RNU2-62P-201ENST00000410868 191 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 RNU6-516P-201ENST00000411381 104 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 HMGB3P23-201ENST00000414981 585 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 AL022238.1-201ENST00000442557 355 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 RAC1P7-201ENST00000445367 377 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 RNU7-59P-201ENST00000459101 61 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 MTCO2P29-201ENST00000465212 189 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 AP002884.2-201ENST00000471647 395 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 AC026801.2-201ENST00000515352 425 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 SNORA18.6-201ENST00000516792 115 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 AL391156.1-201ENST00000554965 554 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 KC877982.1-201ENST00000602313 470 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 AL355472.4-201ENST00000610233 626 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 Z99129.1-201ENST00000612510 255 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 AL603758.1-201ENST00000618654 241 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 AC058791.1-201ENST00000608412 3198 ntBASIC3.78□□□□□ -1.8
HDAC6Q9UBN7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
HDAC6Q9UBN7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 RNA5SP197-201ENST00000363357 119 ntBASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 RNU6-432P-201ENST00000384196 109 ntBASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 Y_RNA.517-201ENST00000384551 106 ntBASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 Y_RNA.582-201ENST00000391023 95 ntBASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 RNU6-754P-201ENST00000391166 107 ntBASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 AL357075.1-201ENST00000404107 726 ntBASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 RNU2-43P-201ENST00000410306 190 ntBASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 RPL31P12-201ENST00000422587 358 ntBASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 AC137499.1-201ENST00000427602 88 ntBASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 ARPC3P1-201ENST00000437218 533 ntBASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 AC093156.1-201ENST00000440382 670 ntBASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 AL671855.1-201ENST00000446875 1203 ntBASIC3.77□□□□□ -1.81
HDAC6Q9UBN7 MTND1P12-201ENST00000455231 147 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms