Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RN7SL499P-201ENST00000481141 276 ntBASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 AC034222.1-201ENST00000494052 532 ntBASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 AC034244.1-201ENST00000507687 207 ntBASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 AC093809.1-201ENST00000509155 340 ntBASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 HMGN1P28-201ENST00000521340 364 ntBASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 UBTFL10-201ENST00000528532 562 ntBASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 AC007954.1-201ENST00000554198 494 ntBASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 ZNF861P-201ENST00000588126 639 ntBASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 AC106791.2-201ENST00000604680 391 ntBASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 AL035413.2-201ENST00000604801 525 ntBASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 AC092106.3-201ENST00000611308 722 ntBASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 AC079597.1-201ENST00000624306 508 ntBASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 LRRC77P-213ENST00000637727 880 ntBASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 SDAD1P2-201ENST00000441308 2028 ntBASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLCF1Q9UBD9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 RNU5E-8P-201ENST00000363502 116 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 RNU6-931P-201ENST00000363850 107 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 RNU6-114P-201ENST00000384704 105 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 MIR34A-201ENST00000385130 110 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 U3.20-201ENST00000390909 217 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 RN7SKP266-201ENST00000410232 287 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 RNU2-52P-201ENST00000410680 190 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 RNU6-516P-201ENST00000411381 104 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 MTCO1P17-201ENST00000411522 491 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 PIGPP2-201ENST00000411569 458 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 MRPL50P2-201ENST00000416821 482 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 AC018630.2-202ENST00000422992 927 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 NDUFB4P7-201ENST00000423198 363 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 AL390023.1-201ENST00000428836 262 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 Z73417.1-201ENST00000447373 778 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 RPL30P5-201ENST00000494923 336 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 MTCYBP43-201ENST00000513621 740 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 AGGF1P5-201ENST00000567900 919 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 MIR4513-201ENST00000581077 86 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 AC131902.3-201ENST00000611767 581 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 AL020991.1-201ENST00000612314 373 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 AC027309.3-201ENST00000623419 351 ntBASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.44□□□□□ -2.02
CLCF1Q9UBD9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 TPTE2P4-201ENST00000258589 1605 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 DDX10P1-201ENST00000448545 1933 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 AL672167.1-206ENST00000356293 943 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 SNORA14A-201ENST00000364773 135 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 SNORA36C-201ENST00000384289 132 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 AL008987.1-201ENST00000415528 237 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 HSPE1P1-201ENST00000421494 318 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 RPL7L1P10-201ENST00000427790 463 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 AL035407.1-201ENST00000429211 571 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 AC092573.2-201ENST00000434546 243 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 AC009237.8-201ENST00000445492 379 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 MTND2P24-201ENST00000453434 806 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 AL590639.1-201ENST00000456484 337 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 RN7SL432P-201ENST00000484057 298 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 AC006445.2-201ENST00000510061 472 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 RNU6-798P-201ENST00000516912 103 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 RPL23AP84-201ENST00000571193 464 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 HSPE1P7-201ENST00000604681 321 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 PCMTD1P7-201ENST00000634506 357 ntBASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLCF1Q9UBD9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms