Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC007656.2-201ENST00000624902 4547 ntBASIC3.72□□□□□ -1.81
LRFN1Q9P244 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LRFN1Q9P244 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.72□□□□□ -1.81
LRFN1Q9P244 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LRFN1Q9P244 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
LRFN1Q9P244 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
LRFN1Q9P244 AC016588.2-201ENST00000632484 3021 ntBASIC3.71□□□□□ -1.81
LRFN1Q9P244 MIR208A-201ENST00000362287 71 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 Y_RNA.367-201ENST00000365544 101 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LRFN1Q9P244 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRFN1Q9P244 RNU6-641P-201ENST00000384006 107 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 RNU6-456P-201ENST00000384493 107 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 MIR200C-201ENST00000384980 68 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 MIR513A2-201ENST00000385249 127 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 RPL21P17-201ENST00000397467 475 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 AC092047.1-201ENST00000424997 240 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 MTCO2P19-201ENST00000427513 598 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 RPL23AP69-201ENST00000431134 458 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 HMGB1P27-201ENST00000431429 603 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 AC092573.2-201ENST00000434546 243 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 AC007389.2-201ENST00000434630 306 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 AL451074.3-201ENST00000437709 472 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 AF228730.2-201ENST00000438784 848 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 AL590664.1-201ENST00000448065 339 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 SRRM1P2-201ENST00000464531 1192 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 RPL32P34-201ENST00000486380 400 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 AL160314.1-201ENST00000490836 438 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 AC006499.6-201ENST00000511169 607 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 RN7SKP60-201ENST00000516985 239 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 SUB1P2-201ENST00000556401 297 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 AC034105.3-201ENST00000565294 442 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 OR5H6-203ENST00000642105 978 ntBASIC3.71□□□□□ -1.82
LRFN1Q9P244 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LRFN1Q9P244 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.71□□□□□ -1.82
LRFN1Q9P244 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LRFN1Q9P244 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LRFN1Q9P244 AC027514.1-201ENST00000588561 1603 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LRFN1Q9P244 AC022336.2-201ENST00000568966 2538 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 Y_RNA.159-201ENST00000363674 87 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 SNORD46.1-201ENST00000364139 104 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LRFN1Q9P244 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.7□□□□□ -1.82
LRFN1Q9P244 GOT2P5-201ENST00000433995 546 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.7□□□□□ -1.82
LRFN1Q9P244 SETP5-201ENST00000437270 562 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 RNU6-420P-201ENST00000458780 107 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 RPL23AP62-201ENST00000463396 453 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 RPL9P6-201ENST00000492764 598 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 AC139783.2-201ENST00000504847 1145 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 AC026427.2-201ENST00000506228 536 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 AF213884.2-201ENST00000510417 903 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.7□□□□□ -1.82
LRFN1Q9P244 AP001646.1-201ENST00000527936 915 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 FAM92A1P1-201ENST00000528023 890 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 AC091516.1-201ENST00000549191 703 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.7□□□□□ -1.82
LRFN1Q9P244 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.7□□□□□ -1.82
LRFN1Q9P244 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.7□□□□□ -1.82
LRFN1Q9P244 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.7□□□□□ -1.82
LRFN1Q9P244 MIR5685-201ENST00000579080 79 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 AC024619.4-201ENST00000580924 316 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.7□□□□□ -1.82
LRFN1Q9P244 AL391646.1-201ENST00000603860 190 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 AC008962.1-201ENST00000605729 304 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 AC068831.7-201ENST00000616954 363 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
LRFN1Q9P244 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.7□□□□□ -1.82
LRFN1Q9P244 MTND5P42-201ENST00000637720 498 ntBASIC3.7□□□□□ -1.82
LRFN1Q9P244 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.7□□□□□ -1.82
LRFN1Q9P244 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LRFN1Q9P244 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRFN1Q9P244 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.69□□□□□ -1.82
LRFN1Q9P244 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.69□□□□□ -1.82
LRFN1Q9P244 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRFN1Q9P244 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.69□□□□□ -1.82
LRFN1Q9P244 RPL7P26-201ENST00000333817 754 ntBASIC3.69□□□□□ -1.82
LRFN1Q9P244 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.69□□□□□ -1.82
LRFN1Q9P244 Y_RNA.1-201ENST00000352915 104 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms