Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RPL21P17-201ENST00000397467 475 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 PTMAP2-201ENST00000397627 327 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AL513331.1-201ENST00000411908 397 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 MTND3P17-201ENST00000416968 344 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 BTF3L4P3-201ENST00000418879 476 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AL159169.1-201ENST00000421119 127 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC104651.1-201ENST00000427559 735 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC007919.1-201ENST00000429380 217 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 MTCO3P5-201ENST00000433620 714 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC009237.8-201ENST00000445492 379 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC020550.1-201ENST00000447385 163 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 ANP32BP2-201ENST00000454525 545 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AL359385.1-201ENST00000456509 365 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC004924.1-201ENST00000480160 781 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 RN7SL432P-201ENST00000484057 298 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 TTC39CP1-201ENST00000512513 755 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 SNORA67.7-201ENST00000516664 135 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC022690.1-201ENST00000526681 550 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC004024.1-201ENST00000549244 247 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC245505.1-201ENST00000556398 224 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 MIR3158-1-201ENST00000583596 81 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC078795.2-201ENST00000602835 1252 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AL136363.2-201ENST00000604173 851 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC012442.3-202ENST00000636742 206 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AL392088.2-201ENST00000637607 285 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 HSPE1P11-201ENST00000339579 310 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 RNU6-188P-201ENST00000364207 107 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 RNU6-169P-201ENST00000365336 107 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 SNORA5A-201ENST00000384111 134 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 MIR670-201ENST00000390142 98 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 Y_RNA.582-201ENST00000391023 95 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 FAT1P1-201ENST00000406588 507 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 RN7SKP53-201ENST00000411337 315 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 HMGB3P20-201ENST00000417997 600 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AC091390.3-201ENST00000426478 338 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AC133104.1-201ENST00000429100 218 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 U3.44-201ENST00000458938 192 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 RPL23AP62-201ENST00000463396 453 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 RPL7L1P8-201ENST00000469911 741 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 KCTD9P5-201ENST00000504141 1170 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AC104619.4-201ENST00000510773 249 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 SNORA70.14-201ENST00000516205 110 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 RNU1-95P-201ENST00000516357 160 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 RNU1-128P-201ENST00000516704 160 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AC006960.3-201ENST00000561845 705 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 GLUD1P4-201ENST00000590914 418 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AL670379.6-201ENST00000603753 252 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AL670379.11-201ENST00000604059 253 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AC013553.2-201ENST00000604244 589 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AC008162.1-201ENST00000604718 254 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AL670379.1-201ENST00000604752 252 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AL670379.5-201ENST00000605253 252 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AL670379.12-201ENST00000605291 253 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AL670379.8-201ENST00000605353 252 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AL670379.7-201ENST00000605823 252 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 RNU1-30P-201ENST00000606575 163 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AC138649.3-201ENST00000622154 254 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 AP000553.6-201ENST00000641242 118 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 ZNF807-201ENST00000328088 1707 ntBASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms