Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 MIR5680-201ENST00000577577 84 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 MIR3117-201ENST00000584034 78 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC060766.3-201ENST00000591442 263 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 VN1R92P-201ENST00000598511 928 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AL356280.1-201ENST00000603614 379 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC112220.3-201ENST00000605502 502 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC005046.1-201ENST00000608515 625 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC004908.2-201ENST00000609090 574 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AL133445.2-201ENST00000611191 527 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AL449363.1-201ENST00000617815 186 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC006386.1-201ENST00000619436 415 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC099654.8-201ENST00000637757 681 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 MTCO1P12-201ENST00000414273 1543 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 RNU4-92P-201ENST00000363783 136 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 RNU6-777P-201ENST00000364265 104 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 SNORA71.1-201ENST00000364523 117 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 SNORD116.1-201ENST00000365628 92 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 RNU6-1083P-201ENST00000384022 107 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 SNORA54-201ENST00000384281 123 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 MIR200C-201ENST00000384980 68 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 MIR320C1-201ENST00000408566 88 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC016769.2-201ENST00000414815 475 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AL159987.2-201ENST00000432754 307 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC091390.1-201ENST00000433904 331 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 SNRPEP9-201ENST00000436794 238 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 RSU1P2-202ENST00000437884 485 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 OSTCP8-201ENST00000445117 448 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC104389.3-201ENST00000445629 235 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 DPPA3P1-201ENST00000448050 469 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 snoU109.3-201ENST00000459477 145 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC003982.1-202ENST00000469928 248 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 RPS15AP36-201ENST00000492022 382 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC105252.1-201ENST00000503089 286 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 RNA5SP290-201ENST00000517133 127 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC023813.2-201ENST00000564321 469 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC022662.1-201ENST00000580252 331 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC060771.1-201ENST00000582031 164 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 ZNF861P-201ENST00000588126 639 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC013562.2-201ENST00000611632 603 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 SNHG22-203ENST00000617833 660 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AP000676.3-201ENST00000623299 569 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 CR381653.2-201ENST00000624041 768 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 MIR7515-201ENST00000637837 67 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 FTO-223ENST00000640179 210 ntTSL 5 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 ZNF833P-201ENST00000424938 1494 ntBASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.85□□□□□ -2.11
SND1-IT1Q9HBX3 AC110491.1-201ENST00000562191 2010 ntBASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 MTND5P29-201ENST00000458676 1807 ntBASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 AC092593.1-201ENST00000515413 1815 ntBASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 VTRNA1-1-201ENST00000363120 99 ntBASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 RNU4-68P-201ENST00000364314 141 ntBASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 PTMAP2-201ENST00000397627 327 ntBASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 MTND4P13-201ENST00000402078 1023 ntBASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 AL355143.1-201ENST00000407101 841 ntBASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 RNU2-49P-201ENST00000410666 184 ntBASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 AC023141.4-201ENST00000412031 328 ntBASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 HMGN2P35-201ENST00000412164 270 ntBASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 RPL26P27-201ENST00000414397 437 ntBASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 BPY2DP-201ENST00000422208 265 ntBASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 AC005300.1-201ENST00000428401 373 ntBASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC1.84□□□□□ -2.11
SND1-IT1Q9HBX3 MTATP6P14-201ENST00000455189 673 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms