Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 AC136475.10-201ENST00000620253 385 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 AC048347.1-201ENST00000624621 427 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 MIR6863-201ENST00000636112 90 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 MIR3688-2-201ENST00000636963 87 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDT1Q9H211 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDT1Q9H211 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDT1Q9H211 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDT1Q9H211 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.7□□□□□ -1.82
CDT1Q9H211 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDT1Q9H211 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDT1Q9H211 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CDT1Q9H211 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.69□□□□□ -1.82
CDT1Q9H211 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.69□□□□□ -1.82
CDT1Q9H211 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDT1Q9H211 AL133383.2-201ENST00000622958 2336 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 RNU6-1090P-201ENST00000364065 94 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 SNORD6-201ENST00000365444 73 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 Y_RNA.409-201ENST00000383990 98 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 MIR181A1-201ENST00000385026 110 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 AL136116.1-201ENST00000403591 381 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 OR1AA1P-201ENST00000419597 916 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.69□□□□□ -1.82
CDT1Q9H211 AL109913.1-201ENST00000421173 514 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.69□□□□□ -1.82
CDT1Q9H211 AC244098.2-201ENST00000422068 99 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 AL158156.1-201ENST00000422509 473 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 AC005326.1-201ENST00000429197 123 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 RPL21P112-201ENST00000434403 463 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 AL121601.2-201ENST00000438019 707 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 AC073614.1-201ENST00000438690 650 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.69□□□□□ -1.82
CDT1Q9H211 WASF1P1-201ENST00000447560 1131 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 RN7SL601P-201ENST00000471221 293 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.69□□□□□ -1.82
CDT1Q9H211 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.69□□□□□ -1.82
CDT1Q9H211 SNORA70.19-201ENST00000516717 90 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 RNU6-528P-201ENST00000516926 100 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 MTCO2P4-201ENST00000517968 247 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 AP000907.2-201ENST00000530827 353 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 AL356432.3-201ENST00000568952 465 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 OR4K8P-201ENST00000578842 1048 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.69□□□□□ -1.82
CDT1Q9H211 MIR3118-1-201ENST00000581787 76 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CDT1Q9H211 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.69□□□□□ -1.82
CDT1Q9H211 LARP7P1-201ENST00000605576 316 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 AC096577.2-201ENST00000611455 153 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 AC112204.3-201ENST00000623822 332 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.69□□□□□ -1.82
CDT1Q9H211 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.69□□□□□ -1.82
CDT1Q9H211 AL513302.2-201ENST00000562313 1842 ntBASIC3.69□□□□□ -1.82
CDT1Q9H211 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.69□□□□□ -1.82
CDT1Q9H211 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDT1Q9H211 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.68□□□□□ -1.82
CDT1Q9H211 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.68□□□□□ -1.82
CDT1Q9H211 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDT1Q9H211 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.68□□□□□ -1.82
CDT1Q9H211 GNG5P1-201ENST00000255500 204 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDT1Q9H211 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.68□□□□□ -1.82
CDT1Q9H211 Y_RNA.450-201ENST00000384198 113 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 RAP1BP3-201ENST00000407180 549 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 AC091390.3-201ENST00000426478 338 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 ISCA1P6-201ENST00000427740 390 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.68□□□□□ -1.82
CDT1Q9H211 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.68□□□□□ -1.82
CDT1Q9H211 MTND3P21-201ENST00000433774 331 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.68□□□□□ -1.82
CDT1Q9H211 HMGB1P31-201ENST00000437242 427 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.68□□□□□ -1.82
CDT1Q9H211 RPS3AP12-201ENST00000443616 753 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDT1Q9H211 AC079448.1-201ENST00000449377 373 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 CEACAMP4-201ENST00000457676 421 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.68□□□□□ -1.82
CDT1Q9H211 RPS4XP2-201ENST00000458402 793 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CDT1Q9H211 ARL4AP2-201ENST00000507378 601 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.68□□□□□ -1.82
CDT1Q9H211 AC074344.1-201ENST00000512823 224 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 Y_RNA.672-201ENST00000516289 104 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 FAM92A1P1-201ENST00000528023 890 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDT1Q9H211 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.68□□□□□ -1.82
CDT1Q9H211 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.68□□□□□ -1.82
CDT1Q9H211 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.68□□□□□ -1.82
CDT1Q9H211 MIR4644-201ENST00000579929 84 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 MIR4276-201ENST00000584832 70 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 AC068790.3-201ENST00000602988 553 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 XIAPP1-201ENST00000603162 600 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 AC011468.4-201ENST00000603942 409 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 AC103710.1-201ENST00000610003 901 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 AC012531.5-201ENST00000611375 151 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.68□□□□□ -1.82
CDT1Q9H211 MIR8058-201ENST00000615737 89 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms