Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 AL161734.1-201ENST00000609720 557 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 AC107871.2-201ENST00000612894 502 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 RNU1-112P-201ENST00000364401 164 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 RNU6-114P-201ENST00000384704 105 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 MIR9-1-201ENST00000385198 89 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 MIR181B1-201ENST00000385240 110 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 RPL23AP29-201ENST00000397284 453 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 MIR1284-201ENST00000408337 120 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 HMGN2P35-201ENST00000412164 270 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AL513175.2-201ENST00000422071 443 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 NANOGP5-201ENST00000424456 877 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 ZNF863P-201ENST00000426746 417 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 SNRPEP7-201ENST00000438350 220 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 BNIP3P2-201ENST00000441221 577 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 WASF1P1-201ENST00000447560 1131 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 MTND1P31-201ENST00000449206 961 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 MEMO1P3-201ENST00000459811 302 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 KC877373.1-201ENST00000479066 408 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AC079395.1-201ENST00000510981 262 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 RN7SKP40-201ENST00000517211 242 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 EIF4BP1-201ENST00000554881 351 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AC005951.2-201ENST00000576282 495 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AL160281.1-201ENST00000605307 311 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AC103710.4-201ENST00000609301 899 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AC093838.1-201ENST00000613014 469 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AL138713.1-201ENST00000624026 2130 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AC006386.2-201ENST00000624491 75 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AC012005.1-201ENST00000624575 75 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AC019226.1-201ENST00000625666 515 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 AC116618.1-201ENST00000634617 774 ntBASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
POLR1EQ9GZS1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 RNU4-68P-201ENST00000364314 141 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 Y_RNA.311-201ENST00000365068 96 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AL590004.2-201ENST00000404787 371 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 RNU2-25P-201ENST00000411041 191 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AC092047.1-201ENST00000424997 240 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AC092648.1-201ENST00000425870 423 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AC112220.1-201ENST00000434628 355 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 UBE2V1P13-201ENST00000436983 439 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AC024589.1-201ENST00000512207 263 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 MRPS36P2-201ENST00000512569 299 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AL133271.1-201ENST00000538229 291 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AC079600.2-201ENST00000550076 130 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AC106052.1-201ENST00000608029 497 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 MIR7106-201ENST00000612419 65 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AC079395.3-201ENST00000615161 484 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 AL161431.1-201ENST00000618966 4205 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 CR848007.1-201ENST00000442354 1699 ntBASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
POLR1EQ9GZS1 RNU6-621P-201ENST00000364752 109 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 RNU1-39P-201ENST00000383897 165 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 RNU6-217P-201ENST00000384164 104 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AL139095.1-201ENST00000404326 391 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AL953862.1-201ENST00000423016 168 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AC092427.1-202ENST00000430569 476 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms