Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
TRIM4Q9C037 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM4Q9C037 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 SEC63P2-201ENST00000503863 1939 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 Y_RNA.796-201ENST00000364268 102 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 Y_RNA.799-201ENST00000364992 102 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 RNA5SP88-201ENST00000365560 109 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 RNA5SP354-201ENST00000391247 136 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 ZNF90P2-204ENST00000419323 1075 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 snoU13.28-201ENST00000459235 104 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 PABPC1P3-201ENST00000469174 459 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 OR52A4P-202ENST00000481634 799 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 OR52A4P-203ENST00000498233 1014 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 RPL38P4-201ENST00000502376 214 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 FAM92A1P2-202ENST00000504766 877 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 RNU6-760P-201ENST00000516078 97 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 RNU6-1095P-201ENST00000516148 108 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 MTCYBP20-201ENST00000524239 1129 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 EEF1B2P4-201ENST00000551398 348 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 VN1R80P-201ENST00000597126 338 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 snoU13.31-201ENST00000607291 104 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 AC093673.2-201ENST00000609674 331 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 AC025588.4-201ENST00000615802 908 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 Z99496.1-201ENST00000469424 1477 ntBASIC2.11□□□□□ -2.07
TRIM4Q9C037 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.11□□□□□ -2.07
TRIM4Q9C037 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM4Q9C037 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.1□□□□□ -2.07
TRIM4Q9C037 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TRIM4Q9C037 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRIM4Q9C037 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRIM4Q9C037 SNORA25.9-201ENST00000365087 128 ntBASIC2.1□□□□□ -2.07
TRIM4Q9C037 SNORD82-201ENST00000365530 70 ntBASIC2.1□□□□□ -2.07
TRIM4Q9C037 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.1□□□□□ -2.07
TRIM4Q9C037 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.1□□□□□ -2.07
TRIM4Q9C037 AL023284.1-201ENST00000403956 276 ntBASIC2.1□□□□□ -2.07
TRIM4Q9C037 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.1□□□□□ -2.07
TRIM4Q9C037 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.1□□□□□ -2.07
TRIM4Q9C037 MTATP6P11-201ENST00000428071 670 ntBASIC2.1□□□□□ -2.07
TRIM4Q9C037 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.1□□□□□ -2.07
TRIM4Q9C037 ARPC3P1-201ENST00000437218 533 ntBASIC2.1□□□□□ -2.07
TRIM4Q9C037 AL591719.1-201ENST00000444669 744 ntBASIC2.1□□□□□ -2.07
TRIM4Q9C037 BX248409.1-201ENST00000455497 255 ntBASIC2.1□□□□□ -2.07
TRIM4Q9C037 AC092798.1-201ENST00000458542 409 ntBASIC2.1□□□□□ -2.07
TRIM4Q9C037 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.1□□□□□ -2.07
TRIM4Q9C037 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.1□□□□□ -2.07
TRIM4Q9C037 BTF3P12-201ENST00000519620 469 ntBASIC2.1□□□□□ -2.07
TRIM4Q9C037 GLYCAM1-201ENST00000546596 285 ntBASIC2.1□□□□□ -2.07
TRIM4Q9C037 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.1□□□□□ -2.07
TRIM4Q9C037 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.1□□□□□ -2.07
TRIM4Q9C037 AC107214.2-201ENST00000608204 634 ntBASIC2.1□□□□□ -2.07
TRIM4Q9C037 AP002826.1-201ENST00000608835 315 ntBASIC2.1□□□□□ -2.07
TRIM4Q9C037 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.1□□□□□ -2.07
TRIM4Q9C037 OR1S1-201ENST00000624470 978 ntBASIC2.1□□□□□ -2.07
TRIM4Q9C037 AC093591.3-201ENST00000634516 308 ntBASIC2.1□□□□□ -2.07
TRIM4Q9C037 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.1□□□□□ -2.07
TRIM4Q9C037 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRIM4Q9C037 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.09□□□□□ -2.07
TRIM4Q9C037 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRIM4Q9C037 SNORA3A-201ENST00000364113 130 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 U8.13-201ENST00000390842 128 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 RNU6-1197P-201ENST00000391183 107 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 TAF9BP2-201ENST00000400856 499 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.09□□□□□ -2.07
TRIM4Q9C037 RNU6-321P-201ENST00000410912 106 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.09□□□□□ -2.07
TRIM4Q9C037 ARL2BPP3-201ENST00000421226 480 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.09□□□□□ -2.07
TRIM4Q9C037 AC234781.2-201ENST00000426370 994 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 RPL7L1P10-201ENST00000427790 463 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.09□□□□□ -2.07
TRIM4Q9C037 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.09□□□□□ -2.07
TRIM4Q9C037 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.09□□□□□ -2.07
TRIM4Q9C037 EIF4EP3-201ENST00000498782 656 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.09□□□□□ -2.07
TRIM4Q9C037 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.09□□□□□ -2.07
TRIM4Q9C037 HSPE1P18-201ENST00000517602 280 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 AC118942.1-201ENST00000529674 1035 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
TRIM4Q9C037 GNAI2P1-201ENST00000541815 315 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.09□□□□□ -2.07
TRIM4Q9C037 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.09□□□□□ -2.07
TRIM4Q9C037 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.09□□□□□ -2.07
TRIM4Q9C037 AC135628.1-201ENST00000568867 534 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 MIR3117-201ENST00000584034 78 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms