Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC015917.1-201ENST00000579654 510 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 MIR4795-201ENST00000584182 89 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 MIR4298-201ENST00000584380 73 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 AL353997.4-201ENST00000586196 166 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 AC010928.3-201ENST00000587712 541 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 RMST_8.1-201ENST00000610287 165 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 AL158801.5-201ENST00000623123 465 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 CR392039.5-201ENST00000623201 510 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 OTUD4P1-201ENST00000237841 3067 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 SNORA63-201ENST00000363450 132 ntBASIC4.25□□□□□ -1.73
SALL3Q9BXA9 ARF4P3-201ENST00000397387 509 ntBASIC4.25□□□□□ -1.73
SALL3Q9BXA9 AL031679.1-201ENST00000400616 525 ntBASIC4.25□□□□□ -1.73
SALL3Q9BXA9 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 AC005534.2-201ENST00000431047 433 ntBASIC4.25□□□□□ -1.73
SALL3Q9BXA9 RPS3AP12-201ENST00000443616 753 ntBASIC4.25□□□□□ -1.73
SALL3Q9BXA9 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 NUP58P1-201ENST00000502546 1738 ntBASIC4.25□□□□□ -1.73
SALL3Q9BXA9 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.25□□□□□ -1.73
SALL3Q9BXA9 VWA8P1-201ENST00000510889 176 ntBASIC4.25□□□□□ -1.73
SALL3Q9BXA9 RNU2-27P-201ENST00000516185 142 ntBASIC4.25□□□□□ -1.73
SALL3Q9BXA9 RNU6-1153P-201ENST00000516760 105 ntBASIC4.25□□□□□ -1.73
SALL3Q9BXA9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 MAGOH2P-202ENST00000584384 429 ntBASIC4.25□□□□□ -1.73
SALL3Q9BXA9 AC006116.10-201ENST00000591836 581 ntBASIC4.25□□□□□ -1.73
SALL3Q9BXA9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 RMST_3.1-201ENST00000611651 109 ntBASIC4.25□□□□□ -1.73
SALL3Q9BXA9 DISC2.1-201ENST00000612827 205 ntBASIC4.25□□□□□ -1.73
SALL3Q9BXA9 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 HSPA8P1-201ENST00000425843 1833 ntBASIC4.25□□□□□ -1.73
SALL3Q9BXA9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.25□□□□□ -1.73
SALL3Q9BXA9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SALL3Q9BXA9 MIR30E-201ENST00000362104 92 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 RNA5SP502-201ENST00000362694 119 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 RNU4-79P-201ENST00000362764 141 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AL590004.1-201ENST00000405321 300 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 RPL23AP48-201ENST00000406913 488 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.24□□□□□ -1.73
SALL3Q9BXA9 BTF3L4P3-201ENST00000418879 476 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AC008065.1-201ENST00000428525 348 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 SAR1AP4-201ENST00000429225 591 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AC091286.1-201ENST00000431233 461 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 MRPS18BP2-201ENST00000434310 759 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AL357552.1-201ENST00000445254 415 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 MTND4P19-201ENST00000446659 478 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AC002381.1-201ENST00000447049 280 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AC021146.1-201ENST00000511202 716 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AC022861.1-201ENST00000522981 663 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AC103843.2-201ENST00000530523 682 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AC008127.2-201ENST00000549925 1075 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 LSM6P2-201ENST00000552208 177 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.24□□□□□ -1.73
SALL3Q9BXA9 MIR3167-201ENST00000579623 85 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AC010591.1-201ENST00000603941 649 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AC055876.5-201ENST00000605667 259 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 OR10AB1P-201ENST00000609613 938 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.24□□□□□ -1.73
SALL3Q9BXA9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.24□□□□□ -1.73
SALL3Q9BXA9 AC107081.3-201ENST00000612715 2034 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SALL3Q9BXA9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SALL3Q9BXA9 XPOTP1-201ENST00000443317 2398 ntBASIC4.24□□□□□ -1.73
SALL3Q9BXA9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SALL3Q9BXA9 RNU6-1097P-201ENST00000363586 107 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms