Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AC007938.2-201ENST00000604666 2634 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AC112198.2-201ENST00000426589 6996 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AC008568.2-201ENST00000623862 2313 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 LINC01109-201ENST00000603837 3081 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 RNA5SP361-201ENST00000362686 118 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 Y_RNA.121-201ENST00000363309 113 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 RNU6-76P-201ENST00000384060 104 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 MIR188-201ENST00000385034 86 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 RPL11P3-201ENST00000395256 523 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AL357075.1-201ENST00000404107 726 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 MIR1250-201ENST00000408098 113 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AL158156.1-201ENST00000422509 473 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 ELOBP4-201ENST00000423418 296 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 PTGES3P4-201ENST00000426243 356 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 POU5F1P5-201ENST00000445059 658 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 IFNA11P-201ENST00000446352 526 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AC002553.3-201ENST00000453002 341 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 RPS5P7-201ENST00000456664 608 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AC018638.3-201ENST00000461273 132 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 RPL26P26-201ENST00000480251 434 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 RN7SL413P-201ENST00000482700 297 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 RNU6-1114P-201ENST00000516022 107 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 RNU6-567P-201ENST00000516746 107 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 Y_RNA.710-201ENST00000516975 110 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 RMST_6.1-201ENST00000611980 203 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AP001005.3-201ENST00000622049 129 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AC090617.7-201ENST00000623952 126 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 SCARNA4-201ENST00000629045 128 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 STX3-208ENST00000641815 3236 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 AC010329.2-201ENST00000595195 2737 ntBASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.41□□□□□ -1.7
SSBP4Q9BWG4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SSBP4Q9BWG4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.4□□□□□ -1.7
SSBP4Q9BWG4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
SSBP4Q9BWG4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
SSBP4Q9BWG4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SSBP4Q9BWG4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
SSBP4Q9BWG4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SSBP4Q9BWG4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.4□□□□□ -1.7
SSBP4Q9BWG4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.4□□□□□ -1.7
SSBP4Q9BWG4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SSBP4Q9BWG4 RNA5SP429-201ENST00000363688 109 ntBASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 RNU1-139P-201ENST00000391307 165 ntBASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 CRIP1P1-201ENST00000427567 185 ntBASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 MTATP6P4-201ENST00000427725 675 ntBASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 AC011742.1-201ENST00000431448 434 ntBASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 AL929410.2-201ENST00000451170 189 ntBASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 SDC4P-201ENST00000453285 601 ntBASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 RPL23AP3-201ENST00000453844 468 ntBASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 AC108161.1-201ENST00000461060 402 ntBASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 RN7SL350P-201ENST00000492591 299 ntBASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 RNA5SP434-201ENST00000516647 121 ntBASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 RN7SKP49-201ENST00000516675 260 ntBASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 KLKP1-201ENST00000595979 403 ntBASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms