Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AP002770.2-201ENST00000543613 532 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC009097.3-201ENST00000563557 1018 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC025281.1-201ENST00000567026 265 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 ISCA1P3-201ENST00000577104 373 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 MIR5092-201ENST00000583139 88 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 VN1R78P-201ENST00000597393 564 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC068313.1-201ENST00000604028 1008 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AL158211.4-201ENST00000606988 584 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 U4.3-201ENST00000621047 82 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC068880.4-201ENST00000623082 495 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC120349.2-201ENST00000625002 298 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AL159972.1-201ENST00000625150 448 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 CTSLP2-204ENST00000629029 392 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 MIR4275-201ENST00000636486 87 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.76□□□□□ -2.13
UPK3BQ9BT76 RNU5B-4P-201ENST00000363508 111 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 U3.12-201ENST00000364498 214 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
UPK3BQ9BT76 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
UPK3BQ9BT76 MIR524-201ENST00000385242 87 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
UPK3BQ9BT76 TAS2R15P-201ENST00000390674 928 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AL031679.1-201ENST00000400616 525 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 DHFRP6-201ENST00000401776 268 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AL079342.2-201ENST00000403367 482 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AL513475.1-201ENST00000406602 315 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 RNU2-42P-201ENST00000410697 113 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.76□□□□□ -2.13
UPK3BQ9BT76 USP9YP27-201ENST00000418455 438 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AC092047.1-201ENST00000424997 240 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.76□□□□□ -2.13
UPK3BQ9BT76 GTF2IP20-201ENST00000431663 360 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 PIGFP3-201ENST00000441918 722 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AC079776.3-201ENST00000450665 370 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AC079804.2-201ENST00000490376 200 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AC138853.1-201ENST00000503549 823 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.76□□□□□ -2.13
UPK3BQ9BT76 ATP5F1P5-201ENST00000526403 760 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AL133271.1-201ENST00000538229 291 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.76□□□□□ -2.13
UPK3BQ9BT76 MTATP6P2-201ENST00000603319 678 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AL645944.1-201ENST00000603857 493 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AL161729.4-201ENST00000604650 476 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AL390208.1-201ENST00000605885 644 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AC243773.3-201ENST00000613270 256 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 AC253576.2-201ENST00000618815 580 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.76□□□□□ -2.13
UPK3BQ9BT76 MIR7515-201ENST00000637837 67 ntBASIC1.76□□□□□ -2.13
UPK3BQ9BT76 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.76□□□□□ -2.13
UPK3BQ9BT76 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
UPK3BQ9BT76 CDR1-202ENST00000625883 1485 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 FTLP6-201ENST00000355274 422 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AL445529.1-201ENST00000398713 389 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AL603865.2-201ENST00000401679 213 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 HMGB1P17-201ENST00000403495 628 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 RPS7P9-201ENST00000414704 586 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AL139421.1-201ENST00000423010 169 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 USP9YP22-201ENST00000438971 294 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AC126389.1-201ENST00000477436 290 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 LARP1BP2-201ENST00000486594 519 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 SUMO2P6-201ENST00000505273 288 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 HMGB3P3-201ENST00000510526 400 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AC100870.1-201ENST00000522035 505 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AP001646.1-201ENST00000527936 915 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AL132857.1-201ENST00000555180 708 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms