Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 MIR6748-201ENST00000610433 71 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 HSPA8P4-201ENST00000511877 1920 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 PRO1804-201ENST00000623780 2050 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 Y_RNA.552-201ENST00000384665 112 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 Y_RNA.625-201ENST00000411256 107 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 HMGB1P27-201ENST00000431429 603 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 AC011816.1-201ENST00000441346 546 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 OSTCP8-201ENST00000445117 448 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 RPS11P1-201ENST00000451072 473 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 RNU7-138P-201ENST00000459479 64 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 RPS23P3-201ENST00000470993 430 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 AC073073.1-201ENST00000493920 463 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 RN7SKP46-201ENST00000515942 234 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 AC069113.1-201ENST00000517763 267 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 AC007991.1-201ENST00000522680 631 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 SUB1P3-201ENST00000564581 315 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 HMGN2P28-201ENST00000606102 262 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 SCN1A-220ENST00000641603 12506 ntBASIC5.02□□□□□ -1.61
TRIM56Q9BRZ2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 Y_RNA.288-201ENST00000364854 92 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 RNU6-45P-201ENST00000384471 107 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 RNU6-14P-201ENST00000384630 106 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 AL590704.1-201ENST00000402856 794 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 RNU2-3P-201ENST00000410144 191 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 AC096664.2-201ENST00000411843 406 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 RPL12P3-201ENST00000440080 396 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 PCNPP5-201ENST00000452246 481 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 AL389915.2-201ENST00000454576 441 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 SNRPCP2-201ENST00000504370 475 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 MRPS33P2-201ENST00000507850 322 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 AC108043.1-201ENST00000512696 574 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 RNU6-120P-201ENST00000516077 103 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 SNORA31.22-201ENST00000517204 135 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 AC131281.1-201ENST00000522984 164 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 AL109918.3-201ENST00000603072 338 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 AC016727.2-201ENST00000603988 621 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 AL391684.1-202ENST00000641293 1636 ntBASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM56Q9BRZ2 AC139713.2-215ENST00000641428 5037 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 RNA5SP305-201ENST00000362665 119 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 RNU6-266P-201ENST00000364225 107 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 AL160275.3-201ENST00000423876 471 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 CEACAMP7-201ENST00000444105 496 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 SLC25A15P5-201ENST00000508033 253 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 GMPSP1-201ENST00000514075 579 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 ENPP7P9-201ENST00000514456 627 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 RNA5SP43-201ENST00000516559 110 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 RNA5SP392-201ENST00000516905 112 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms