Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 OR4H12P-201ENST00000556269 907 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 MIR4801-201ENST00000582704 82 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AC105224.1-201ENST00000587055 421 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AL391646.1-201ENST00000603860 190 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AC012443.1-201ENST00000605605 231 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AL360181.4-201ENST00000621752 134 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AL133383.2-201ENST00000622958 2336 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AC006504.1-201ENST00000562493 3666 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AC073346.2-201ENST00000624724 2058 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 CR848007.1-201ENST00000442354 1699 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 RNU6-600P-201ENST00000362524 99 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 RNU6-1284P-201ENST00000363701 100 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 RNA5SP189-201ENST00000364920 115 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 RNU6-39P-201ENST00000384344 107 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 RNU2-9P-201ENST00000410194 145 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 RNU2-36P-201ENST00000410361 191 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AL160275.2-201ENST00000412010 394 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 CYP4F29P-201ENST00000420685 446 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AL158156.1-201ENST00000422509 473 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 MTCO2P19-201ENST00000427513 598 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 ELOCP14-201ENST00000428070 331 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 HMGB3P12-201ENST00000438745 556 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 ELOCP7-201ENST00000439968 331 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 RPL23AP20-201ENST00000447965 421 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 FGF7P3-201ENST00000454645 303 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AC027673.1-201ENST00000456245 405 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AC013267.1-201ENST00000458227 267 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AC010631.1-201ENST00000474150 156 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 RPS27AP1-201ENST00000475545 471 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 HMGB1P22-201ENST00000505315 124 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AC023141.12-201ENST00000512399 199 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 ARL2BPP6-201ENST00000512757 439 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AC100870.1-201ENST00000522035 505 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 ARL2BPP2-201ENST00000550907 489 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AL512360.1-201ENST00000555346 234 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 NCAPGP2-201ENST00000557911 754 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 MIR4293-201ENST00000584305 78 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 MIR8058-201ENST00000615737 89 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 AC110801.1-201ENST00000623590 212 ntBASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.78□□□□□ -1.8
PAAF1Q9BRP4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
PAAF1Q9BRP4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
PAAF1Q9BRP4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC073343.1-201ENST00000328239 651 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 RNU5A-1-201ENST00000362698 116 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 RNU6-1120P-201ENST00000362988 108 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 RNU6-511P-201ENST00000363496 107 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 SNORA51.2-201ENST00000364595 132 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 Y_RNA.481-201ENST00000384373 102 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 MIR1-2-201ENST00000384961 85 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC110754.1-201ENST00000399740 601 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AL121834.1-202ENST00000404494 277 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 RNA5SP239-201ENST00000410218 129 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 RNA5SP104-201ENST00000410989 118 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 MTND1P23-201ENST00000416931 372 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 MTATP6P4-201ENST00000427725 675 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 RPL7L1P10-201ENST00000427790 463 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 OR2AS1P-201ENST00000427827 319 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 USP12PX-201ENST00000432383 1057 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 MTND2P24-201ENST00000453434 806 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC084357.1-201ENST00000473404 255 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms