Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
MEIS3Q99687 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
MEIS3Q99687 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.72□□□□□ -1.81
MEIS3Q99687 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
MEIS3Q99687 ASNSP1-201ENST00000518311 1939 ntBASIC3.72□□□□□ -1.81
MEIS3Q99687 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
MEIS3Q99687 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.71□□□□□ -1.81
MEIS3Q99687 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
MEIS3Q99687 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
MEIS3Q99687 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.71□□□□□ -1.82
MEIS3Q99687 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.71□□□□□ -1.82
MEIS3Q99687 DBF4P1-201ENST00000412976 1892 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 AL512646.1-201ENST00000269395 1077 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 OR5J1P-201ENST00000313544 939 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
MEIS3Q99687 MIR92A2-201ENST00000385299 75 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
MEIS3Q99687 DHFRP6-201ENST00000401776 268 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 U3.42-201ENST00000408746 214 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 AC073264.1-201ENST00000411508 416 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 PRELID3BP11-201ENST00000414230 479 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 MTCO1P20-201ENST00000425366 358 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.71□□□□□ -1.82
MEIS3Q99687 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
MEIS3Q99687 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.71□□□□□ -1.82
MEIS3Q99687 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.71□□□□□ -1.82
MEIS3Q99687 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.71□□□□□ -1.82
MEIS3Q99687 RPL21P41-201ENST00000459863 264 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 RPS27P29-201ENST00000463110 252 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
MEIS3Q99687 RN7SL633P-201ENST00000488974 297 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.71□□□□□ -1.82
MEIS3Q99687 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.71□□□□□ -1.82
MEIS3Q99687 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.71□□□□□ -1.82
MEIS3Q99687 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.71□□□□□ -1.82
MEIS3Q99687 AC046134.1-201ENST00000514454 666 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.71□□□□□ -1.82
MEIS3Q99687 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.71□□□□□ -1.82
MEIS3Q99687 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.71□□□□□ -1.82
MEIS3Q99687 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.71□□□□□ -1.82
MEIS3Q99687 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.71□□□□□ -1.82
MEIS3Q99687 MTND1P35-201ENST00000526739 508 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 AP003181.2-201ENST00000528941 181 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.71□□□□□ -1.82
MEIS3Q99687 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.71□□□□□ -1.82
MEIS3Q99687 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.71□□□□□ -1.82
MEIS3Q99687 AC009033.1-201ENST00000624279 431 ntBASIC3.71□□□□□ -1.82
MEIS3Q99687 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.71□□□□□ -1.82
MEIS3Q99687 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.71□□□□□ -1.82
MEIS3Q99687 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MEIS3Q99687 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MEIS3Q99687 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
MEIS3Q99687 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
MEIS3Q99687 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
MEIS3Q99687 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
MEIS3Q99687 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
MEIS3Q99687 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.7□□□□□ -1.82
MEIS3Q99687 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.7□□□□□ -1.82
MEIS3Q99687 AP002907.1-201ENST00000606361 1430 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AC006378.2-201ENST00000623178 2476 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 Y_RNA.89-201ENST00000363031 102 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 RNU6-534P-201ENST00000364877 106 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 Y_RNA.402-201ENST00000383972 102 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 RNU6-483P-201ENST00000384088 108 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 SNORA51.12-201ENST00000384448 134 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 RNU6-146P-201ENST00000384602 108 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 MIR320C1-201ENST00000408566 88 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 RNA5SP274-201ENST00000410484 108 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 Y_RNA.608-201ENST00000410647 95 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 RPS3AP9-201ENST00000417027 792 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
MEIS3Q99687 RPL31P35-201ENST00000431058 377 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AL139132.1-201ENST00000431587 344 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AC009961.2-201ENST00000435771 251 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 FTH1P1-201ENST00000437933 532 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.7□□□□□ -1.82
MEIS3Q99687 RNU7-136P-201ENST00000458819 69 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 RNF138P1-201ENST00000502765 546 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 OR5H5P-201ENST00000503164 928 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 TMEM251P1-201ENST00000503717 318 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.7□□□□□ -1.82
MEIS3Q99687 POU5F1P7-201ENST00000508759 541 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AC093809.1-201ENST00000509155 340 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AC025465.4-201ENST00000513422 638 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 RNU6-1153P-201ENST00000516760 105 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.7□□□□□ -1.82
MEIS3Q99687 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.7□□□□□ -1.82
MEIS3Q99687 GLYCAM1-201ENST00000546596 285 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AL389895.1-201ENST00000554127 252 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AL157394.1-201ENST00000562983 1224 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AL391840.1-201ENST00000571144 367 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AC090616.5-202ENST00000582111 297 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 MAGOH2P-202ENST00000584384 429 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AL390208.1-201ENST00000605885 644 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AC008536.2-201ENST00000607284 349 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.7□□□□□ -1.82
MEIS3Q99687 AC103710.1-201ENST00000610003 901 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms