Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 COX6CP2-201ENST00000444980 225 ntBASIC3.87□□□□□ -1.79
SIN3AQ96ST3 AL353691.1-201ENST00000451332 387 ntBASIC3.87□□□□□ -1.79
SIN3AQ96ST3 MTCO2P18-201ENST00000457151 658 ntBASIC3.87□□□□□ -1.79
SIN3AQ96ST3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.87□□□□□ -1.79
SIN3AQ96ST3 SNORD108-201ENST00000459332 71 ntBASIC3.87□□□□□ -1.79
SIN3AQ96ST3 AC104563.1-201ENST00000476147 376 ntBASIC3.87□□□□□ -1.79
SIN3AQ96ST3 RAP1BP2-201ENST00000478270 544 ntBASIC3.87□□□□□ -1.79
SIN3AQ96ST3 RPL9P33-201ENST00000484311 566 ntBASIC3.87□□□□□ -1.79
SIN3AQ96ST3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.87□□□□□ -1.79
SIN3AQ96ST3 AC117522.3-201ENST00000507974 584 ntBASIC3.87□□□□□ -1.79
SIN3AQ96ST3 AC010625.1-201ENST00000511296 403 ntBASIC3.87□□□□□ -1.79
SIN3AQ96ST3 AC091965.2-201ENST00000512324 613 ntBASIC3.87□□□□□ -1.79
SIN3AQ96ST3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.87□□□□□ -1.79
SIN3AQ96ST3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.87□□□□□ -1.79
SIN3AQ96ST3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.87□□□□□ -1.79
SIN3AQ96ST3 AL355836.1-201ENST00000555951 870 ntBASIC3.87□□□□□ -1.79
SIN3AQ96ST3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.87□□□□□ -1.79
SIN3AQ96ST3 MIR4307-201ENST00000582802 84 ntBASIC3.87□□□□□ -1.79
SIN3AQ96ST3 RSL24D1P11-201ENST00000591045 491 ntBASIC3.87□□□□□ -1.79
SIN3AQ96ST3 AC073544.2-201ENST00000601155 540 ntBASIC3.87□□□□□ -1.79
SIN3AQ96ST3 AC025594.3-201ENST00000613068 790 ntBASIC3.87□□□□□ -1.79
SIN3AQ96ST3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIN3AQ96ST3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.87□□□□□ -1.79
SIN3AQ96ST3 MTND5P3-201ENST00000438536 1800 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 TAB3P1-202ENST00000452645 1634 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 Y_RNA.234-201ENST00000364409 97 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 Y_RNA.436-201ENST00000384097 102 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 Y_RNA.548-201ENST00000384656 105 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 MIR124-3-201ENST00000384866 87 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 MTCYBP36-201ENST00000404146 440 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 RNU4-78P-201ENST00000410940 126 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 RN7SKP142-201ENST00000411236 328 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 MTCO1P17-201ENST00000411522 491 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 AC092832.1-201ENST00000422934 400 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 RPL37P21-201ENST00000435890 276 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 AL662791.1-201ENST00000441992 928 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 RPL7P52-201ENST00000449200 742 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 AL109933.2-201ENST00000452651 260 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 HMGB1P15-201ENST00000453854 435 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 SNRPGP9-201ENST00000456025 225 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 AC010424.1-201ENST00000506336 297 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 SNORA9.3-201ENST00000516383 129 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 MIR548AB-201ENST00000584917 84 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 AC064872.1-201ENST00000604823 1072 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.86□□□□□ -1.79
SIN3AQ96ST3 MTND4P4-201ENST00000439033 1366 ntBASIC3.86□□□□□ -1.79
SIN3AQ96ST3 AL049780.3-201ENST00000624612 1583 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.85□□□□□ -1.79
SIN3AQ96ST3 SNORA5B-201ENST00000363786 132 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 RPL17P50-201ENST00000396131 546 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AL512633.1-201ENST00000399931 655 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AC109583.1-201ENST00000432156 268 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.85□□□□□ -1.79
SIN3AQ96ST3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.85□□□□□ -1.79
SIN3AQ96ST3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.85□□□□□ -1.79
SIN3AQ96ST3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.85□□□□□ -1.79
SIN3AQ96ST3 CFTRP1-201ENST00000456646 183 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 TPTE2P5-203ENST00000458118 728 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 snoU109.4-201ENST00000458953 143 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AC078785.3-201ENST00000476607 425 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AP000797.1-201ENST00000478870 387 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 RN7SL297P-201ENST00000483161 293 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AC012170.1-201ENST00000495139 359 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AC082651.2-201ENST00000496833 166 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 COX7A2P2-201ENST00000505291 250 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.85□□□□□ -1.79
SIN3AQ96ST3 RNU6-714P-201ENST00000516963 103 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.85□□□□□ -1.79
SIN3AQ96ST3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.85□□□□□ -1.79
SIN3AQ96ST3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.85□□□□□ -1.79
SIN3AQ96ST3 MIR4635-201ENST00000583759 79 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AC119751.7-201ENST00000600494 245 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AL035413.2-201ENST00000604801 525 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AC004853.1-201ENST00000604902 698 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 RN7SKP299-201ENST00000606679 301 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AC104010.1-201ENST00000616889 150 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 U73479.1-201ENST00000618062 168 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.85□□□□□ -1.79
SIN3AQ96ST3 AC139792.2-201ENST00000624218 587 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms